DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3702 and AT5G08500

DIOPT Version :9

Sequence 1:NP_001260017.1 Gene:CG3702 / 33628 FlyBaseID:FBgn0031590 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_196467.1 Gene:AT5G08500 / 830749 AraportID:AT5G08500 Length:590 Species:Arabidopsis thaliana


Alignment Length:624 Identity:254/624 - (40%)
Similarity:341/624 - (54%) Gaps:81/624 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PAAEGAVIAGNGNAELAQNEGQNEQQQPPPNQPTRMESFFAMTKSLILR-ALIIYFVSSFFRRPA 72
            ||.|.|.:.          ||.:.|||       |....|..|.:.|:| |:..||.|.|| .|.
plant     4 PAGETAAVV----------EGGDGQQQ-------RQAGGFGQTITGIIRIAVFCYFASKFF-SPK 50

  Fly    73 PDAASQGKSVANAGPKITAWNYFENGTDFDLHVWLSENPDVVNFQQKANLLWLQKDLTYGDWTSG 137
            ...|...|      |.....|.|:.|...|:..:|||:....:|..:..|:|.:.::.|..|   
plant    51 QKPADPSK------PTHLMSNLFQRGEPIDMWFYLSEHEKFNDFGNEGALIWHETNIPYAVW--- 106

  Fly   138 VNGDGIYTHSLKLKTSQHLMNNGSVYLHAFVTRTGMSPDPKAPNYATKMGHQQHQLNKF------ 196
             ..:...|.|:....|:.|.||||:|.|.|...:|...|...|.|        ..||.|      
plant   107 -KPESTRTLSMTYYPSEALKNNGSLYAHVFFALSGYPIDLSDPEY--------QPLNCFGRTHPV 162

  Fly   197 ----KKLRVNRNYNLLASEKEKLEHEL-------KHANLKD----TIVSHWHPNLTVNLVVDQTN 246
                .|.:.::..:||.:.|:..|..:       |.::|||    ..||:|.||:|:|||.|.|.
plant   163 ATYLPKRKADKKKSLLGNPKDSDESHVEVEEVDGKDSDLKDEGPVEWVSYWKPNVTINLVDDFTR 227

  Fly   247 WAEGSVPPPLDDYVKFVDGGKTYLPILFVNDYWNLQREYQPINETTPELELHLTFQPLGMFKWQL 311
            :.:..|||.:..|:........|.|.:|.|::|.|:.:...||||..||.|:|...|:.|.||||
plant   228 YPQHGVPPNIYPYLLVEPSTINYYPTVFFNEFWLLRDKLILINETVSELPLNLEVSPISMTKWQL 292

  Fly   312 YAAKQMKNKWA-----GNMLGELMAASQPEESDEDQDSLKETLLDTNIYLLGITVAVSILHSVFE 371
            :  :|:...:.     |:||            |.:.|.||...|:.|.||||:|:.||:|||||:
plant   293 F--QQIDQSFQIHRSYGSML------------DGESDELKRVFLEGNPYLLGVTMFVSMLHSVFD 343

  Fly   372 LLAFKNDIQFWNNRKSLEGLSVRSVFFGVFQSLIILLYVLDNETNFMIRISCFVGLGIEVWKIHK 436
            .|||||||||||..||:||||.:||........||.||:|||:|::||..|..||:.||.|||.|
plant   344 FLAFKNDIQFWNKNKSMEGLSAKSVVLNFICQFIIFLYLLDNDTSWMILASSGVGVCIEFWKIGK 408

  Fly   437 VVDINYDHDQKILGVLPRISFQDKGSYSESSTKDYDKLAFKYLGWACFPLLVAYFVYSLIYNEHK 501
            .:.|..|..    |::||:.|.|:.||:.:.||:||.:|.|:|.:....|:|.:.:|||.|..||
plant   409 AMRIEVDRS----GMIPRLRFHDRESYASNKTKEYDDIAIKFLSYVLLLLVVGFSIYSLAYERHK 469

  Fly   502 GWYSFVLNMLYGYLLTFGFILMTPQLFINYKLKSVAHMPWRMMTYKFLNTFIDDIFAFVIKMPTM 566
            .|||::|:.|...:..||||:|.||||||||||||||:|||.||||||||.|||:||||||||.:
plant   470 SWYSWILSSLTSCVYMFGFIMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPML 534

  Fly   567 YRLGCFRDDIIFFVFLYQRWQYRVDLKRVNEFGFSGEME 605
            :||..||||:||.::|||||.|.||..|||||||.||.|
plant   535 HRLSVFRDDVIFLIYLYQRWVYPVDKTRVNEFGFGGEDE 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3702NP_001260017.1 CLPTM1 55..496 CDD:283294 166/467 (36%)
AT5G08500NP_196467.1 CLPTM1 33..463 CDD:283294 165/466 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 275 1.000 Domainoid score I419
eggNOG 1 0.900 - - E1_KOG2489
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37464
Inparanoid 1 1.050 440 1.000 Inparanoid score I408
OMA 1 1.010 - - QHG54475
OrthoDB 1 1.010 - - D1106937at2759
OrthoFinder 1 1.000 - - FOG0004007
OrthoInspector 1 1.000 - - otm2978
orthoMCL 1 0.900 - - OOG6_100901
Panther 1 1.100 - - LDO PTHR21347
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2768
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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