DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3702 and Clptm1

DIOPT Version :9

Sequence 1:NP_001260017.1 Gene:CG3702 / 33628 FlyBaseID:FBgn0031590 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001099702.1 Gene:Clptm1 / 292696 RGDID:1310959 Length:664 Species:Rattus norvegicus


Alignment Length:669 Identity:335/669 - (50%)
Similarity:444/669 - (66%) Gaps:44/669 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKAGEDQPAAEGAVIAGNG-------NAELAQNEGQNEQQQPPPNQPTRMESFFAMTKSLILRA 58
            |:.|.|...|....|.||.|       |..:.::.....|.|.||.||.  .:.:.:.|.::.|.
  Rat     1 MAAAQEADGAGSAVVAAGGGSSGQVTSNGSIGRDTPAETQPQNPPPQPA--PNAWQVIKGVLFRI 63

  Fly    59 LIIYFVSSFFRR-PAPDAASQGKSVANAGPKITAWNYFENGTDFDLHVWLSENPDVVNFQQKANL 122
            .||:.:||:||| |:|    |.:|.....|::.:.|.|...|..:|||::||:....:|...:.|
  Rat    64 FIIWAISSWFRRGPSP----QDQSGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSAL 124

  Fly   123 LWLQKDLTYGDWTSGVNGDGIYTHSLKLKTSQHLMNNGSVYLHAFVTRTGMSPDPKAPNYATKMG 187
            .|.|.||.|||||||.|.||.|.|..:|...|.:..|||:|:|.:.|::|..|||:......::.
  Rat   125 FWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLA 189

  Fly   188 --HQQHQLNKFKKLRVNRNYNLLASEKEKLEHELKHANLKD----TIVSHWHPNLTVNLVVDQTN 246
              |....:||:|:.|..:..|||..|.|.....:|.|  :|    .::||||||:|:|:|.|.|.
  Rat   190 TVHMSRMINKYKRRRFQKTKNLLTGETEADPEMIKRA--EDYGPVEVISHWHPNITINIVDDHTP 252

  Fly   247 WAEGSVPPPLDDYVKFVDGGKTYLPILFVNDYWNLQREYQPINETTPELELHLTFQPLGMFKWQL 311
            |.:||||||||.||||......|.||::.|||||||::|.||||:...|.|.::|.||.:::|||
  Rat   253 WVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQL 317

  Fly   312 YAAKQMKNKWAGNMLGELMAASQPEESDEDQDSLKETLLDTNIYLLGITVAVSILHSVFELLAFK 376
            |||:..|:.|  |.||:.:.    |:|||:|||:|..||:|:.|||.:|:.|||:|||||.||||
  Rat   318 YAAQSTKSPW--NFLGDELY----EQSDEEQDSVKVALLETSPYLLALTIIVSIVHSVFEFLAFK 376

  Fly   377 NDIQFWNNRKSLEGLSVRSVFFGVFQSLIILLYVLDNETNFMIRISCFVGLGIEVWKIHKVVDIN 441
            |||||||:|:|||||||||||||||||.::|||:|||||||::::|.|:|:.|::|||.||:|:.
  Rat   377 NDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVR 441

  Fly   442 YDHDQKILGVLPRISFQDKGSYSESSTKDYDKLAFKYLGWACFPLLVAYFVYSLIYNEHKGWYSF 506
            .|.:.::.|:.|..:|:||.:|.|||||.||.:||:||.|..||||..|.||||:|.|||||||:
  Rat   442 LDREHRVAGIFPCPTFRDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWYSW 506

  Fly   507 VLNMLYGYLLTFGFILMTPQLFINYKLKSVAHMPWRMMTYKFLNTFIDDIFAFVIKMPTMYRLGC 571
            ||:||||:|||||||.||||||||||||||||:||||:|||.|||||||:||||||||.|||:||
  Rat   507 VLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGC 571

  Fly   572 FRDDIIFFVFLYQRWQYRVDLKRVNEFGFSGEMEQQHAAQKLEGKTANGAIEG------------ 624
            .|||::||::|||||.||||..||||||.||| :...||...:..||.||:..            
  Rat   572 LRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGE-DVSAAASGAQASTAAGALTPSPSTAVTGEDAS 635

  Fly   625 --PQAAPAIKKTAAQKKQD 641
              |.|.|. ..||:|.::|
  Rat   636 TVPTATPG-ACTASQPQED 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3702NP_001260017.1 CLPTM1 55..496 CDD:283294 218/447 (49%)
Clptm1NP_001099702.1 CLPTM1 60..496 CDD:283294 218/447 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354192
Domainoid 1 1.000 450 1.000 Domainoid score I493
eggNOG 1 0.900 - - E1_KOG2489
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37464
Inparanoid 1 1.050 658 1.000 Inparanoid score I740
OMA 1 1.010 - - QHG54475
OrthoDB 1 1.010 - - D1106937at2759
OrthoFinder 1 1.000 - - FOG0004007
OrthoInspector 1 1.000 - - oto97406
orthoMCL 1 0.900 - - OOG6_100901
Panther 1 1.100 - - LDO PTHR21347
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2768
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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