DRSC/TRiP Functional Genomics Resources

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Protein Alignment ft and Pcdhga7

DIOPT Version :10

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:NP_291068.2 Gene:Pcdhga7 / 93715 MGIID:1935219 Length:935 Species:Mus musculus


Alignment Length:1022 Identity:277/1022 - (27%)
Similarity:430/1022 - (42%) Gaps:227/1022 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FEVLEGQPRGTTVGFIPTKPKFSYRFNEPPRE----------------FTLDPVTGEVKTNVVLD 119
            :.|.|...:|:.||.| ||.     ....|||                |:|:|.:|.:.|...:|
Mouse    35 YSVSEETDKGSFVGNI-TKD-----LGLQPRELAERGVRIITKGKTQLFSLNPRSGSLVTAGRID 93

  Fly   120 REGMRDH-------YDLVVLSSQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLL 177
            ||.:...       :::::......|||||  :::|||||:|.|....|.|...|:|..|.|..|
Mouse    94 REELCAQSPRCLVSFNILIEDKMNLYPIEV--EIMDVNDNAPRFLTEEINIKIMENAAPGVRFPL 156

  Fly   178 DAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISA 242
            ..|||:|||:|.: .:|::   :.::.|.||..:...| |.|..|.....||||..|.:.|.::|
Mouse   157 KEATDSDVGKNSL-QRYQL---SPNHHFSLVVQSGDDG-TKYPELVLEKALDREEEGLHHLVLTA 216

  Fly   243 RDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITY 307
            .|||.|.|.|...:.||::||||:.|:|....|..::.|....||.::||.|.|.|.|...::||
Mouse   217 YDGGDPLRSGTASIRVTVVDVNDHTPVFSLPLYQATVPENVPVGTRLLTVNAIDLDEGIYGEVTY 281

  Fly   308 YLAETEHQFTVNPE----------TGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQ 362
            ..      :.:.||          ||.:||.:.::..|.:..:         ..|.|:|......
Mouse   282 SF------WKITPELLQIFHLSSLTGELSTLKGLDYEQSSFYE---------LEVQAQDGAGSLT 331

  Fly   363 DGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIV 427
            ..:..:||  ||.||:.|.::..     ...:.|.|:...|||:|...::|.|||.||..:..: 
Mouse   332 KAKVLITV--LDVNDNAPEVTVT-----SVSSPVPEDTPPGTVIALFYLQDKDSGKNGEVTCSL- 388

  Fly   428 SGNELGHFRLEEAADLHIVRVNG-VLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHE 491
              .|...|:||.:.|.:...|.. .||||::..||:|:.|.|.|.|..:|...:.|.|:|.||:.
Mouse   389 --PENLPFKLERSIDNYYRLVTARNLDREKMSVYNITLKATDGGIPPLSTETRMSIHVSDTNDNP 451

  Fly   492 PVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHY----DILSGNEL-KWFSMDPLTGLI 551
            |.|..|.||..:.|..|.|:.:.|:||.|.|:..||||.|    |.:.|..: .:.|::..||::
Mouse   452 PTFSDSSYSIYVPENNPRGASIFSVTAQDPDSDKNAQVTYALAEDTIQGVPVSSYVSINSDTGIL 516

  Fly   552 VTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQF------SQREQNVTLG- 609
            ...|..|.|....::|.::|||.|..|..:...||:.:||:||.||:.      :.....|.|. 
Mouse   517 YALGSFDYEQFRDLQLRVTARDSGDPPLSSNVSLKLFVLDKNDNAPEILYPALPTDGSTGVELAP 581

  Fly   610 EDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRP-LDREKMSQY 673
            ..|.|..:|..:.|.|.|.|.|..:::.|..:.|   |..|::...||::.|.|. |||:.:.| 
Mouse   582 RSAEPGYLVTKVVAVDKDSGPNAWLSYRLLKASE---PGLFSVGLHTGEVRTARALLDRDALKQ- 642

  Fly   674 EISVIARDQGAPTPQSATATVWLNVA----DVNDNDPQFYPRHYIYSLAD----------DDDDI 724
            .:.|:.:|.|.| |.|||.|:.:.||    ||               |||          ||.||
Mouse   643 NLVVVVQDHGQP-PLSATVTLTVAVANSIPDV---------------LADLGSIRTPSEPDDSDI 691

  Fly   725 KLKKEVEKERI----LLHVTASDKDDGDNALIEYRL----------ESGGEGLFQLDAR------ 769
            .|...|....:    |:.||         .|:..||          .|.|.||..:.|.      
Mouse   692 TLYLVVAVATVSCVFLVFVT---------VLLALRLWRWHKSHMLQASSGGGLEDVPASHFVGLD 747

  Fly   770 ---------SGAISLRGDAPAS--MHWKPHYKLLVSARDAGQRRSQQDAIVEIVLKSKLEMLEC- 822
                     |..:||..|:..|  :..:|:|...:.::|:.::...        |.:.::..|| 
Mouse   748 GVQAFLQTYSHEVSLTADSRKSHIIFPQPNYVDTLISQDSCEKSDS--------LLTSIDFQECK 804

  Fly   823 GQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDRAQNFRIDTRSGR 887
            |:|.:.    |....:...|.||..|       ..|:|..|         ||.            
Mouse   805 GEAPSS----QQAPPNTDWRFSQAQR-------PGTSGSQN---------GDE------------ 837

  Fly   888 ITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTI 952
             |...|.::.:....:..||||:|.::..:::               |...|....|.....|..
Mouse   838 -TGTWPNNQFDTEMLQAMILASASEAADGSST---------------LGGGAGTMGLSARYGPQF 886

  Fly   953 SLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQFRIGPVTG 999
            :|.......|.:|:       .|.|:    :|||...::....|..|
Mouse   887 TLQHVPDYRQNVYI-------PGSNA----TLTNAAGKRDGKAPAGG 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637 27/103 (26%)
Cadherin_repeat 163..266 CDD:206637 39/102 (38%)
Cadherin_repeat 275..378 CDD:206637 27/112 (24%)
Cadherin_repeat 393..490 CDD:206637 34/97 (35%)
Cadherin_repeat 498..594 CDD:206637 33/100 (33%)
Cadherin_repeat 603..704 CDD:206637 35/106 (33%)
Cadherin_repeat 735..814 CDD:206637 19/109 (17%)
Cadherin 843..>907 CDD:394985 10/63 (16%)
Cadherin 950..1026 CDD:394985 11/50 (22%)
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637
Cadherin_repeat 1827..1918 CDD:206637
Cadherin_repeat 1926..2023 CDD:206637
Cadherin_repeat 2031..2162 CDD:206637
Cadherin_repeat 2172..2274 CDD:206637
Cadherin_repeat 2282..2380 CDD:206637
Cadherin_repeat 2388..2487 CDD:206637
Cadherin_repeat 2495..2592 CDD:206637
Cadherin_repeat 2600..2694 CDD:206637
Cadherin_repeat 2710..2806 CDD:206637
Cadherin_repeat 2814..2909 CDD:206637
Cadherin_repeat 2917..3009 CDD:206637
Cadherin 3018..3114 CDD:394985
Cadherin 3129..3220 CDD:394985
Cadherin_repeat 3233..3330 CDD:206637
Cadherin_repeat 3338..3434 CDD:206637
Cadherin_repeat 3443..3541 CDD:206637
Cadherin_repeat 3550..3647 CDD:206637
Cadherin_repeat 3657..3753 CDD:206637
EGF 4017..4047 CDD:394967
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:395008
LamG 4428..4543 CDD:238058
Pcdhga7NP_291068.2 Cadherin_2 32..114 CDD:462413 19/84 (23%)
Cadherin_repeat 139..240 CDD:206637 40/105 (38%)
Cadherin_repeat 249..345 CDD:206637 27/112 (24%)
Cadherin_repeat 358..450 CDD:206637 34/94 (36%)
Cadherin_repeat 458..560 CDD:206637 34/101 (34%)
Cadherin_repeat 581..666 CDD:206637 29/89 (33%)
Cadherin_C_2 690..775 CDD:465139 20/93 (22%)
Cadherin_tail 814..>908 CDD:435046 25/148 (17%)
Blue background indicates that the domain is not in the aligned region.

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