DRSC/TRiP Functional Genomics Resources

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Protein Alignment ft and Celsr3

DIOPT Version :10

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:NP_112610.1 Gene:Celsr3 / 83466 RGDID:621787 Length:3313 Species:Rattus norvegicus


Alignment Length:1798 Identity:494/1798 - (27%)
Similarity:774/1798 - (43%) Gaps:288/1798 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  2911 PKFTRL-FSLNVTENAEIGSFVIRVTSSDLDLGANANASYS----FSENPGEKFRIEPQSGNITV 2970
            |:|.:. :...|.||...|:.|:||.:.|.|.|......||    .:....|.|.|:||||.|..
  Rat   314 PQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRT 378

  Fly  2971 AGHLDREQQDEYILKVVASD-GAWR--AETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALV 3032
            |..||||..:.:.|:|.|.| |:.|  |.|.:.:|:.|:||:||.||.:.|..:..|..:....:
  Rat   379 AAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEGYPI 443

  Fly  3033 GQIIATDRDKQGPNSVISY-------SLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMY 3090
            .|:.|||.|.. ||:.:.|       :....:..|.|||.:|.:.:...|..:|.:       .|
  Rat   444 LQLRATDGDAP-PNANLRYRFVGSPAARTAAAAAFEIDPRSGLISTSGRVDREHME-------SY 500

  Fly  3091 ALTVLATDNGKP--PLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQD 3153
            .|.|.|:|.|:.  |..:...|:|.::|.::|.|:|.:..|:|.:.:|......::||.|.||..
  Rat   501 ELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDK 565

  Fly  3154 LGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVV-I 3217
            .....:.|::::.|....|::....|.|.::.|:.......|.|.:||.|.|.||.|:.|.:. |
  Rat   566 DANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASI 630

  Fly  3218 VVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFSVDER 3282
            .|...|..:|.|....:||.|.||.|:|.:::.:.|.|.|.|.|..|.||::|......|.::..
  Rat   631 QVVDINDHSPIFVSTPFQVSVLENAPLGHSVIHIQAVDADHGENSRLEYSLTGVASDTPFVINSA 695

  Fly  3283 TGGIVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENK 3347
            ||.:.:...||.:.::.|...:..:|.|..|||:.|.:|:.:.|||||.|.|..||||..:.|:.
  Rat   696 TGWVSVSGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDA 760

  Fly  3348 PVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSN-GTISSAVSFDYEERRIYTLQIK 3411
            .|||.|....|.|:|:  |:.|.|..........|.|..|.. |.::.|:..||::.|.:.|.:.
  Rat   761 AVGTSVVSVTAVDRDA--NSAISYQITGGNTRNRFAISTQGGMGLVTLALPLDYKQERYFKLVLT 823

  Fly  3412 AKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYY 3476
            |.  |.::..:..:::::...|...|.|....:...::|...||:.|..:.|:|.|.||:.|:.|
  Rat   824 AS--DRALHDHCYVHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITY 886

  Fly  3477 LLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND 3541
            ||  ..|...||||.::|.|.:...||.|.|....|.:.|::.|..:..||...:|:::  |.||
  Rat   887 LL--EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVN--DVND 947

  Fly  3542 -PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIING-NLKQSFKIDVQTGEIS 3604
             .|:|:..:||..:||.||..|.|..:.|.|:|... |.:..|:..|| :....|.|:..:|.:.
  Rat   948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPTSGIVR 1011

  Fly  3605 TASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTS 3669
            |..|||||....|.|...|:|.|:||.....::.:.::|||||.|.|..|.....:.||...|:.
  Rat  1012 TVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076

  Fly  3670 IMTLIASDPDLPRNGGP---FTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVED 3731
            :..:.|.|||    .||   ..||::.|.......:|..||.:.:....|.|...  |.:|.|:.
  Rat  1077 VAQITAVDPD----DGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQ--EYVIVVQA 1135

  Fly  3732 SGKPKQKSQHLLTITVLDQNDNPSTTRSLHIAVSLFNG-------DLPSNVKLADVRPNDIDIV- 3788
            :..| ..|:..:.:.::|||||.....:..|   |||.       ..||.: :..:...|.|:. 
  Rat  1136 TSAP-LVSRATVHVRLVDQNDNSPVLNNFQI---LFNNYVSNRSDTFPSGI-IGRIPAYDPDVSD 1195

  Fly  3789 --------GDYRCRLQKNPAQSQLQLAIPRACDLITTSHTTPIASVFSYTGNDGKHGDVSSKVSV 3845
                    |:....|..|....:|:|:  |..|     :..|:.:....|..||.| .|:::..:
  Rat  1196 HLFYSFERGNELQLLVVNQTSGELRLS--RKLD-----NNRPLVASMLVTVTDGLH-SVTAQCVL 1252

  Fly  3846 AFQSFNNETLANSVSIMVRNMTAYHFLANHYRPILEMIKSRMSN-EDEVILYSLLEGGSGNSTNL 3909
            .......|.||||:::.:.||....||:......||.:.:.::. .::|.::::........|.|
  Rat  1253 RVVIITEELLANSLTVRLENMWQERFLSPLLGHFLEGVAAVLATPTEDVFIFNIQNDTDVGGTVL 1317

  Fly  3910 QL---LMAVRLAKTSYQQPKYLIERLRE----KRSAFSELLQKEVIVGYEPCSEPDVCENGGVCS 3967
            .:   .:|.|.|......|.:..|.|:|    :|:|.:.....:|:...:.....:.|||...|.
  Rat  1318 NVSFSALAPRGAGAGAAGPWFSSEELQEQLYVRRAALAARSLLDVLPFDDNVCLREPCENYMKCV 1382

  Fly  3968 ATMRLLDAHSFVIQDS----PALVLSGPRVVHDYSCQCTSGFSGEQCSRRQDPCLPNPCHSQVQC 4028
            :.:|...:..|:...|    |...::|.|      |:|..||:|                     
  Rat  1383 SVLRFDSSAPFLASASTLFRPIQPIAGLR------CRCPPGFTG--------------------- 1420

  Fly  4029 RRLGSDFQCMCPANRDGKHCEKERSDVCYSKPCRNGGSCQRSPDGSSYFCLCRPGFRGNQCESVS 4093
                 ||            ||.| .|:|||.||||||:|.|...|  |.|:|||.|.|..||..:
  Rat  1421 -----DF------------CETE-LDLCYSNPCRNGGACARREGG--YTCVCRPRFTGEDCELDT 1465

  Fly  4094 DS--CRPNPCLHGGLCVSL-KPGYKCNCTPGR--YGRHCERFSYGFQPLSYMTFPALDVTTN-DI 4152
            ::  |.|..|.:||.|.:. ..|::|.|..|.  .|..||..:..|.|.|::.|..|....: .:
  Rat  1466 EAGRCVPGVCRNGGTCTNAPNGGFRCQCPAGGAFEGPRCEVAARSFPPSSFVMFRGLRQRFHLTL 1530

  Fly  4153 SIVFATTKPNSLLLYNYGMQSGGRSDFLAIELVHG--RAYFSSGGARTAISTVIAGRNLADGGWH 4215
            |:.|||.:|:.||.||..:..  :.||||:|||.|  |..:|:|.:.|.:|..:.| .|:||.||
  Rat  1531 SLSFATVQPSGLLFYNGRLNE--KHDFLALELVAGQVRLTYSTGESSTVVSPTVPG-GLSDGQWH 1592

  Fly  4216 KV---------TATRNG-------RVMSLSVAKCADSGDVCTECLPGDSSCYADEVGPVGTLNFN 4264
            .|         |....|       :|..|||..|..:..:......|:.||.|     .|....:
  Rat  1593 TVHLRYYNKPRTDALGGAQGPSKDKVAVLSVDDCNVAVALRFGAEIGNYSCAA-----AGVQTSS 1652

  Fly  4265 KQ------PLMIGGLSSADPILERPGQVHSDDLVGCLHSVHIGGRALNLSLPLQQKGILAGCNRQ 4323
            |:      ||::||:    |.|.....|...|.:||:..:||.||.::::..:...|..|||  |
  Rat  1653 KKSLDLTGPLLLGGV----PNLPENFPVSRKDFIGCMRDLHIDGRRVDMAAFVANNGTTAGC--Q 1711

  Fly  4324 ACQPALAAERCGGFAGQCIDRWSSSLCQCGGHLQSPDCSDSLEPITLGEGAFVEFRISEIYRRMQ 4388
            |.....|:..|.. .|.|.:||....|.|.......||                        |:.
  Rat  1712 AKSHFCASGPCKN-GGLCSERWGGFSCDCPVGFGGKDC------------------------RLT 1751

  Fly  4389 LLDNLY---NSKSAWLDNQQMRERRAVSNFSTASQIYEAPKMLSMLFRTYKDQG----------Q 4440
            :....:   |...:|             :|.....: ..|..|.:.|||...:|          .
  Rat  1752 MAHPYHFQGNGTLSW-------------DFGNDMPV-SVPWYLGLSFRTRATKGVLMQVQLGPHS 1802

  Fly  4441 ILYAATNQ--MFTSLSLREGRLVYYSKQHLTINMTVQETSTLNDGKWHNVSL------------- 4490
            :|....:|  :..:||...|..|     ||.:     :..|::||:||::.|             
  Rat  1803 VLLCKLDQGLLSVTLSRASGHAV-----HLLL-----DQMTVSDGRWHDLRLELQEEPGGRRGHH 1857

  Fly  4491 -FSESRSLRLIVDGRQVGDELDIAGVHDFLDPYLTILNVGG----------EAFVGCLANVTVNN 4544
             |..|....|..|...:|.||:...|..        |:|||          :..|||:..|... 
  Rat  1858 IFMVSLDFTLFQDTMAMGSELEGLKVKH--------LHVGGPPPSSKEEGPQGLVGCIQGVWTG- 1913

  Fly  4545 ELQPLNGSGSIFPEVRYHGKIESGCRGDIGQDAAQVADPLSIG 4587
             ..|...|.  .|...:...:|.||         .|.:|.:.|
  Rat  1914 -FTPFGSSA--LPPPSHRINVEPGC---------TVTNPCASG 1944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637
Cadherin_repeat 603..704 CDD:206637
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:394985
Cadherin 950..1026 CDD:394985
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637
Cadherin_repeat 1827..1918 CDD:206637
Cadherin_repeat 1926..2023 CDD:206637
Cadherin_repeat 2031..2162 CDD:206637
Cadherin_repeat 2172..2274 CDD:206637
Cadherin_repeat 2282..2380 CDD:206637
Cadherin_repeat 2388..2487 CDD:206637
Cadherin_repeat 2495..2592 CDD:206637
Cadherin_repeat 2600..2694 CDD:206637
Cadherin_repeat 2710..2806 CDD:206637
Cadherin_repeat 2814..2909 CDD:206637
Cadherin_repeat 2917..3009 CDD:206637 36/98 (37%)
Cadherin 3018..3114 CDD:394985 26/104 (25%)
Cadherin 3129..3220 CDD:394985 25/91 (27%)
Cadherin_repeat 3233..3330 CDD:206637 32/96 (33%)
Cadherin_repeat 3338..3434 CDD:206637 25/96 (26%)
Cadherin_repeat 3443..3541 CDD:206637 31/97 (32%)
Cadherin_repeat 3550..3647 CDD:206637 34/97 (35%)
Cadherin_repeat 3657..3753 CDD:206637 25/98 (26%)
EGF 4017..4047 CDD:394967 2/29 (7%)
EGF_CA 4056..4090 CDD:238011 19/33 (58%)
EGF_CA 4094..4128 CDD:238011 11/38 (29%)
Laminin_G_1 4156..4306 CDD:395008 55/173 (32%)
LamG 4428..4543 CDD:238058 35/150 (23%)
Celsr3NP_112610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..187
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..269
Cadherin_repeat 321..420 CDD:206637 36/98 (37%)
Cadherin_repeat 428..532 CDD:206637 27/111 (24%)
Cadherin_repeat 541..638 CDD:206637 27/96 (28%)
Cadherin_repeat 646..743 CDD:206637 32/96 (33%)
Cadherin_repeat 751..845 CDD:206637 26/97 (27%)
Cadherin_repeat 853..948 CDD:206637 32/98 (33%)
Cadherin_repeat 956..1054 CDD:206637 34/98 (35%)
Cadherin_repeat 1062..1156 CDD:206637 25/100 (25%)
Cadherin_repeat 1176..1257 CDD:206637 17/89 (19%)
EGF_CA 1428..1462 CDD:238011 20/35 (57%)
EGF_CA 1472..1505 CDD:238011 10/32 (31%)
LamG 1508..1691 CDD:238058 58/194 (30%)
EGF_CA 1717..1748 CDD:238011 8/31 (26%)
LamG 1755..1911 CDD:238058 38/187 (20%)
EGF_CA 1939..1973 CDD:238011 2/6 (33%)
EGF_CA 1973..2011 CDD:238011
Laminin_EGF <1994..2033 CDD:395007
EGF_Lam 2030..>2054 CDD:238012
EGF_Lam 2067..>2105 CDD:238012
HormR 2117..2181 CDD:214468
GAIN 2200..2448 CDD:465137
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2356..2395
GPS 2474..2527 CDD:197639
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 2478..2528
7tm_GPCRs 2534..2787 CDD:475119
TM helix 1 2537..2561 CDD:320659
TM helix 2 2570..2591 CDD:320659
TM helix 3 2601..2623 CDD:320659
TM helix 4 2642..2658 CDD:320659
TM helix 5 2677..2700 CDD:320659
TM helix 6 2723..2745 CDD:320659
TM helix 7 2749..2774 CDD:320659
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2887..2927
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2977..3004
Atrophin-1 <3089..>3311 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3091..3242
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3255..3313
Blue background indicates that the domain is not in the aligned region.

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