DRSC/TRiP Functional Genomics Resources

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Protein Alignment ft and PCDH10

DIOPT Version :10

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:XP_011530452.1 Gene:PCDH10 / 57575 HGNCID:13404 Length:1057 Species:Homo sapiens


Alignment Length:1008 Identity:272/1008 - (26%)
Similarity:408/1008 - (40%) Gaps:234/1008 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FEVLEGQPRGTTVGFIPTK-----PKFSYR-FNEPPREFT----LDPVTGEVKTNVVLDREGMRD 125
            :.|.|.|..||.||.|...     .|.|.| |...|...|    |:..||.:..|..:|||.:..
Human    22 YTVQEEQEHGTFVGNIAEDLGLDITKLSARGFQTVPNSRTPYLDLNLETGVLYVNEKIDREQICK 86

  Fly   126 H-----YDLVVLSSQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADV 185
            .     ..|.|....|....:|.|:|||:|||.|.||||.:.:..|||||.|||..|::|.|.||
Human    87 QSPSCVLHLEVFLENPLELFQVEIEVLDINDNPPSFPEPDLTVEISESATPGTRFPLESAFDPDV 151

  Fly   186 GENGVTDQYEIVAGNVDNKFRL-VTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGS-- 247
            |.|.:.| |||..   ::.|.| |.|.......:.|.||..  ||||.:..::..::|.|||.  
Human   152 GTNSLRD-YEITP---NSYFSLDVQTQGDGNRFAELVLEKP--LDREQQAVHRYVLTAVDGGGGG 210

  Fly   248 --------------PP---RFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMAS 295
                          ||   |.|...:.:.:||.|||.|.||...|.|||.|.:.|||.|:.:.|:
Human   211 GVGEGGGGGGGAGLPPQQQRTGTALLTIRVLDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNAT 275

  Fly   296 DNDLGDNSKITYYLA-----ETEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVF-- 353
            |.|.|.|.::.|..:     .....|.::|.||.:..:..::           .::|.|:.|:  
Human   276 DPDEGQNGEVVYSFSSHISPRARELFGLSPRTGRLEVSGELD-----------YEESPVYQVYVQ 329

  Fly   354 ARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGL 418
            |:|.|.........|.|.:||.||:.|.|||....:     .|.|.|..|||||..:|.|.||..
Human   330 AKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKE-----AVSEGAAPGTVVALFSVTDRDSEE 389

  Fly   419 NGRTSVRIVSGNELGH--FRLEEA-ADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHL 480
            ||:....:     ||.  |||:.: .:.:.:.....||||....|.|||||.|:|.||.:|:..:
Human   390 NGQVQCEL-----LGDVPFRLKSSFKNYYTIVTEAPLDREAGDSYTLTVVARDRGEPALSTSKSI 449

  Fly   481 IIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDIL-----SGNELK 540
            .:.|:||||:.|.|.:..|...::|....|:::.:::|||.|.|.|||:.|.||     ..:...
Human   450 QVQVSDVNDNAPRFSQPVYDVYVTENNVPGAYIYAVSATDRDEGANAQLAYSILECQIQGMSVFT 514

  Fly   541 WFSMDPLTGLIVTTGPLDREIRDTVELSISARD-GGPNPKFAYTQLKVIILDENDEAPQF----- 599
            :.|::...|.:......|.|........:.||| |.|........:.::|:|:||.||..     
Human   515 YVSINSENGYLYALRSFDYEQLKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLP 579

  Fly   600 -----SQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQL 659
                 ..||   .|...|.|..::..:.|.|.|.|.|..:|:::....|...   |.:|..||:|
Human   580 GRNGTPARE---VLPRSAEPGYLLTRVAAVDADDGENARLTYSIVRGNEMNL---FRMDWRTGEL 638

  Fly   660 TTRR--PLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQ-----------FYPR 711
            .|.|  |..|:....||:.:..||.|.| |.|:|||:.:.:.| ...:||           .:.|
Human   639 RTARRVPAKRDPQRPYELVIEVRDHGQP-PLSSTATLVVQLVD-GAVEPQGGGGSGGGGSGEHQR 701

  Fly   712 ------------------------HYIYSLA--------DDDDDIKL------------------ 726
                                    .:|:.||        ..:..:.:                  
Human   702 PSRSGGGETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGGG 766

  Fly   727 ------------KKEVEKERILLHVTASDKDDGDNALIEYRLESGGEG--------LFQL----- 766
                        ||::.|..|:|..:::...:.....||   ||||.|        .:|:     
Human   767 GSTCCGRQARARKKKLSKSDIMLVQSSNVPSNPAQVPIE---ESGGFGSHHHNQNYCYQVCLTPE 828

  Fly   767 DARSGAISLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEIVLKSKLEMLECGQAQAGGYE 831
            .|::..:.|:..:|              :|......:...|||......:.:::..|...:...:
Human   829 SAKTDLMFLKPCSP--------------SRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETK 879

  Fly   832 FQMVE-----DHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGD-------RAQNFRIDTR 884
            .|..|     |..::.||...:|..||..|. :|..:|.      |||       |||:..:|..
Human   880 HQRAELSYLVDRPRRVNSSAFQEADIVSSKD-SGHGDSE------QGDSDHDATNRAQSAGMDLF 937

  Fly   885 SGRITTAR--------------PLDREEQANYR 903
            |......:              |.|..:.|:||
Human   938 SNCTEECKALGHSDRCWMPSFVPSDGRQAADYR 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637 30/95 (32%)
Cadherin_repeat 163..266 CDD:206637 41/122 (34%)
Cadherin_repeat 275..378 CDD:206637 30/109 (28%)
Cadherin_repeat 393..490 CDD:206637 38/99 (38%)
Cadherin_repeat 498..594 CDD:206637 25/101 (25%)
Cadherin_repeat 603..704 CDD:206637 32/102 (31%)
Cadherin_repeat 735..814 CDD:206637 17/91 (19%)
Cadherin 843..>907 CDD:394985 21/82 (26%)
Cadherin 950..1026 CDD:394985
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637
Cadherin_repeat 1827..1918 CDD:206637
Cadherin_repeat 1926..2023 CDD:206637
Cadherin_repeat 2031..2162 CDD:206637
Cadherin_repeat 2172..2274 CDD:206637
Cadherin_repeat 2282..2380 CDD:206637
Cadherin_repeat 2388..2487 CDD:206637
Cadherin_repeat 2495..2592 CDD:206637
Cadherin_repeat 2600..2694 CDD:206637
Cadherin_repeat 2710..2806 CDD:206637
Cadherin_repeat 2814..2909 CDD:206637
Cadherin_repeat 2917..3009 CDD:206637
Cadherin 3018..3114 CDD:394985
Cadherin 3129..3220 CDD:394985
Cadherin_repeat 3233..3330 CDD:206637
Cadherin_repeat 3338..3434 CDD:206637
Cadherin_repeat 3443..3541 CDD:206637
Cadherin_repeat 3550..3647 CDD:206637
Cadherin_repeat 3657..3753 CDD:206637
EGF 4017..4047 CDD:394967
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:395008
LamG 4428..4543 CDD:238058
PCDH10XP_011530452.1 Cadherin_2 19..101 CDD:462413 23/78 (29%)
Cadherin_repeat 128..246 CDD:206637 41/123 (33%)
Cadherin_repeat 254..354 CDD:206637 30/110 (27%)
Cadherin_repeat 367..459 CDD:206637 38/96 (40%)
Cadherin_repeat 467..570 CDD:206637 26/102 (25%)
Cadherin_repeat 590..680 CDD:206637 30/93 (32%)
Cadherin_C_2 713..838 CDD:465139 17/127 (13%)
Blue background indicates that the domain is not in the aligned region.

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