DRSC/TRiP Functional Genomics Resources

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Protein Alignment ft and PCDHA6

DIOPT Version :10

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:NP_061732.1 Gene:PCDHA6 / 56142 HGNCID:8672 Length:950 Species:Homo sapiens


Alignment Length:669 Identity:204/669 - (30%)
Similarity:314/669 - (46%) Gaps:69/669 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FEVLEGQPRGTTVGFIPTK---------PKFSYRFNEPPREFTLDP--VTGEVKTNVVLDREGM- 123
            :.|.|....||.||.|...         |:. :|.....||..|:.  ..|.:..|..:|||.: 
Human    33 YSVPEEAKHGTFVGRIAQDLGLELAELVPRL-FRMASKDREDLLEVNLQNGILFVNSRIDREELC 96

  Fly   124 ------RDHYDLVVLSSQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATD 182
                  ..|.:::|  .:|.....|.::|.|:|||.|.||.....:...||....:...|:.|:|
Human    97 GRSAECSIHLEVIV--DRPLQVFHVDVEVRDINDNPPLFPVEEQRVLIYESRLPDSVFPLEGASD 159

  Fly   183 ADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGS 247
            ||||.|.:. .|::.:...   |.|....| |.|...:.|....:||||...::.|.::|.|||.
Human   160 ADVGSNSIL-TYKLSSSEY---FGLDVKIN-SDDNKQIGLLLKKSLDREEAPAHNLFLTATDGGK 219

  Fly   248 PPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITY----- 307
            |...|.:|:.||:||||||.|.|:.|:|.|.:.|.|..||.|:.:.|||.|.|.|..|:|     
Human   220 PELTGTVQLLVTVLDVNDNAPTFEQSEYEVRIFENADNGTTVIRLNASDRDEGANGAISYSFNSL 284

  Fly   308 YLAETEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNL 372
            ..|.....|:::..||.|.....::..|:...|         ..:.|.|.|.|...|...|.|.:
Human   285 VAAMVIDHFSIDRNTGEIVIRGNLDFEQENLYK---------ILIDATDKGHPPMAGHCTVLVRI 340

  Fly   373 LDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGH--F 435
            ||.||:.|.|:.....     ..|.|:|..|||:|.::|.|.|||.||:.:..:..     |  |
Human   341 LDKNDNVPEIALTSLS-----LPVREDAQFGTVIALISVNDLDSGANGQVNCSLTP-----HVPF 395

  Fly   436 RLEEA-ADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY 499
            :|... .:.:.:.::..||||.:..|.|.|.|.|.|:|:...||.|.::|.|:||:.|.|.:.||
Human   396 KLVSTFKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASLSVEVADMNDNAPAFAQPEY 460

  Fly   500 SAVLSELAPTGSFVASITATDEDTGVNAQVHYDILS---GNEL--KWFSMDPLTGLIVTTGPLDR 559
            :..:.|..|.|..:.:::|.|.|...||.|.|.::.   |...  .:.|:...:|.:....|||.
Human   461 TVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYISVHAESGKVYALQPLDH 525

  Fly   560 EIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLG--EDAPPQT-----I 617
            |..:.::..:||||.|..|..:...|:|.:|||||.||.........|.|  .:..|::     :
Human   526 EELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVSELVPRSLGAGQV 590

  Fly   618 VALMTATDHDQGTNGSVTFALAPSVERL-YPLQFALDALTGQLTTRRPLDREKMSQYEISVIARD 681
            ||.:.|.|.|.|.|..:::.|.|..... :|  |.:...||:::|.|.||.....::.:.|:.:|
Human   591 VAKVRAVDADSGYNAWLSYELQPPASSARFP--FRVGLYTGEISTTRVLDEADSPRHRLLVLVKD 653

  Fly   682 QGAPTPQSATATVWLNVAD 700
            .|.|. .:|||||.:::.:
Human   654 HGEPA-LTATATVLVSLVE 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637 24/98 (24%)
Cadherin_repeat 163..266 CDD:206637 35/102 (34%)
Cadherin_repeat 275..378 CDD:206637 32/107 (30%)
Cadherin_repeat 393..490 CDD:206637 34/99 (34%)
Cadherin_repeat 498..594 CDD:206637 30/100 (30%)
Cadherin_repeat 603..704 CDD:206637 29/106 (27%)
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:394985
Cadherin 950..1026 CDD:394985
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637
Cadherin_repeat 1827..1918 CDD:206637
Cadherin_repeat 1926..2023 CDD:206637
Cadherin_repeat 2031..2162 CDD:206637
Cadherin_repeat 2172..2274 CDD:206637
Cadherin_repeat 2282..2380 CDD:206637
Cadherin_repeat 2388..2487 CDD:206637
Cadherin_repeat 2495..2592 CDD:206637
Cadherin_repeat 2600..2694 CDD:206637
Cadherin_repeat 2710..2806 CDD:206637
Cadherin_repeat 2814..2909 CDD:206637
Cadherin_repeat 2917..3009 CDD:206637
Cadherin 3018..3114 CDD:394985
Cadherin 3129..3220 CDD:394985
Cadherin_repeat 3233..3330 CDD:206637
Cadherin_repeat 3338..3434 CDD:206637
Cadherin_repeat 3443..3541 CDD:206637
Cadherin_repeat 3550..3647 CDD:206637
Cadherin_repeat 3657..3753 CDD:206637
EGF 4017..4047 CDD:394967
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:395008
LamG 4428..4543 CDD:238058
PCDHA6NP_061732.1 Cadherin_2 30..111 CDD:462413 19/80 (24%)
Cadherin_repeat 137..238 CDD:206637 35/105 (33%)
Cadherin_repeat 246..346 CDD:206637 32/108 (30%)
Cadherin_repeat 354..451 CDD:206637 34/106 (32%)
Cadherin_repeat 459..561 CDD:206637 31/101 (31%)
Cadherin_repeat 581..670 CDD:206637 27/91 (30%)
4 X 4 AA repeats of P-X-X-P 799..894
Cadherin_tail 800..916 CDD:435046
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 830..950
Blue background indicates that the domain is not in the aligned region.

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