DRSC/TRiP Functional Genomics Resources

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Protein Alignment ft and PCDHA10

DIOPT Version :10

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:NP_061724.1 Gene:PCDHA10 / 56139 HGNCID:8664 Length:948 Species:Homo sapiens


Alignment Length:627 Identity:187/627 - (29%)
Similarity:295/627 - (47%) Gaps:73/627 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 GEVKTNVVLDREGM-------RDHYDLVVLSSQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSE 167
            |.:..|..:|||.:       ..|.:::|  .:|.....|.::|.|:|||.|.|......:|..|
Human    81 GILFVNSRIDREELCGRSVECSIHLEVIV--D
RPLQVFHVDVEVKDINDNPPRFSVTEQKLSIPE 143

  Fly   168 SATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRES 232
            |....:|..|:.|:|||||||.:. .|::    ..|::.::...|......:..|.....||||.
Human   144 SRLLDSRFPLEGASDADVGENALL-TYKL----SPNEYFVLDIINKKDKDKFPVLVLRKLLDREE 203

  Fly   233 RGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDN 297
            ....:|.::|.|||.|...|.:.:.:.:||.|||.||||...|.|.:.|..:..|.|:.:.|||:
Human   204 NPQLKLLLTATDGGKPEFTGSVSLLILVLDANDN
APIFDRPVYEVKMYENQVNQTLVIRLNASDS 268

  Fly   298 DLGDNSKITYYLAE-----TEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDH 357
            |.|.|.::.|..:.     ...:|.:|..||.|...:.::.......:         ..|...|.
Human   269 DEGINKEMMYSFSSLVPPTIRRKFWINERTGEIKVNDAIDFEDSNTYE---------IHVDVTDK 324

  Fly   358 GSPRQDGRTYVTVNLLDTNDHDP--IISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNG 420
            |:|...|...|.|.|||.||:.|  |::....|       |.|:|..|||:|.::|.|.|||.||
Human   325 GNPPMVGHCTVLVELLDENDN
SPEVIVTSLSLP-------VKEDAQVGTVIALISVSDHDSGANG 382

  Fly   421 RTSVRIVSGNELGH--FRLEEA-ADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLII 482
            :.:..:..     |  |:|... .:.:.:.::..||||.:..|.|.|.|.|.|:|....||.:.:
Human   383 QVTCSLTP-----HVPFKLVSTYKNYYSLVLDSALDRERVSAYELVVTARDGGSPPLWATASVSV 442

  Fly   483 DVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDI----LSGNEL-KWF 542
            :|.||||:.|.|.:|||:..:.|..|.|..:.:::|.|.|...||.|.|.:    |....| .:.
Human   443 EVADVNDN
APAFAQSEYTVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRLGERSLSSYV 507

  Fly   543 SMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQRE---- 603
            |:...:|.:....|||.|..:.::..:||||||..|..:...|:|.:|||||.||......    
Human   508 SVHAESGKVYALQPLDHEELELLQFQVSARDGGVPPLGSNLTLQVFVLDENDN
APALLASPAGSA 572

  Fly   604 ---------QNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFAL-APSVERLYPLQFALDALTGQ 658
                     ::|..|.      :||.:.|.|.|.|.|..:::.| :.:|....|  |.:...||:
Human   573 GGAVSELVLRSVVAGH------VVAKVRAVDADSGYNAWLSYELQSAAVGARIP--FRVGLYTGE 629

  Fly   659 LTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVAD 700
            ::|.|.||.....:..:.|:.:|.|.|: .:|||||.:::.:
Human   630 ISTTRALDETDSPRQRLLVLVKDHGEPS-LTATATVLVSLVE 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637 12/48 (25%)
Cadherin_repeat 163..266 CDD:206637 31/102 (30%)
Cadherin_repeat 275..378 CDD:206637 28/107 (26%)
Cadherin_repeat 393..490 CDD:206637 34/99 (34%)
Cadherin_repeat 498..594 CDD:206637 32/100 (32%)
Cadherin_repeat 603..704 CDD:206637 28/112 (25%)
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:394985
Cadherin 950..1026 CDD:394985
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637
Cadherin_repeat 1827..1918 CDD:206637
Cadherin_repeat 1926..2023 CDD:206637
Cadherin_repeat 2031..2162 CDD:206637
Cadherin_repeat 2172..2274 CDD:206637
Cadherin_repeat 2282..2380 CDD:206637
Cadherin_repeat 2388..2487 CDD:206637
Cadherin_repeat 2495..2592 CDD:206637
Cadherin_repeat 2600..2694 CDD:206637
Cadherin_repeat 2710..2806 CDD:206637
Cadherin_repeat 2814..2909 CDD:206637
Cadherin_repeat 2917..3009 CDD:206637
Cadherin 3018..3114 CDD:394985
Cadherin 3129..3220 CDD:394985
Cadherin_repeat 3233..3330 CDD:206637
Cadherin_repeat 3338..3434 CDD:206637
Cadherin_repeat 3443..3541 CDD:206637
Cadherin_repeat 3550..3647 CDD:206637
Cadherin_repeat 3657..3753 CDD:206637
EGF 4017..4047 CDD:394967
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:395008
LamG 4428..4543 CDD:238058
PCDHA10NP_061724.1 Cadherin_2 29..110 CDD:462413 7/30 (23%)
Cadherin_repeat 136..237 CDD:206637 31/105 (30%)
Cadherin_repeat 245..345 CDD:206637 28/108 (26%)
Cadherin_repeat 353..450 CDD:206637 35/108 (32%)
Cadherin_repeat 458..560 CDD:206637 33/101 (33%)
Cadherin_repeat 580..669 CDD:206637 28/97 (29%)
6 X 4 AA repeats of P-X-X-P 732..892
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 783..804
Cadherin_tail 798..914 CDD:435046
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 827..948
Blue background indicates that the domain is not in the aligned region.

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