DRSC/TRiP Functional Genomics Resources

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Protein Alignment ft and PCDHA12

DIOPT Version :10

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:NP_061726.1 Gene:PCDHA12 / 56137 HGNCID:8666 Length:941 Species:Homo sapiens


Alignment Length:937 Identity:241/937 - (25%)
Similarity:391/937 - (41%) Gaps:194/937 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   928 VNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQF 992
            |::.:.|:|||.|||   ||.|..:.:.|:|.:.....|....|.|.||||.::|:|:.|.|.:.
Human   119 VDVEVKDINDNPPVF---REREQKVPVSESAPLDSHFPLEGASDADIGVNSLLTYALSLNENFEL 180

  Fly   993 RI-----GPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHT 1052
            :|     ..:...|.|::.:..|....:::.||..|.|.|.|:..:.:.:.:.||||:.|.||..
Human   181 KIKTKKDKSILPELVLRKLLDREQTPKLNLLLMVIDGGKPELTGSVQIQITVLDVNDNGPAFDKP 245

  Fly  1053 SYETSLPETTKVNTRFFALAATDIDLGDNGRISY---EIIEGNTERMFGVFPD-GYLFVRAPLDR 1113
            ||:..|.|..:.:||...|.|:|.|.|.||.|||   .|:..:.:.||.:.|| |.:.:...||.
Human   246 SYKVVLSENVQNDTRVIQLNASDPDEGLNGEISYGIKMILPVSEKCMFSINPDTGEIRIYGELDF 310

  Fly  1114 EERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAV 1178
            ||.:.|.:.|:..|.|.||.:....|::.|:|.|||.|:...::.:..:.|:|...|.:..::..
Human   311 EENNAYEIQVNAIDKGIPSMAGHSMVLVEVLDVNDNVPEVMVTSLSLPVQEDAQVGTVIALISVS 375

  Fly  1179 DRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNY 1243
            |||.|.|.::..:|:...                ||   .||...:|..:...|.:|.......|
Human   376 DRDSGANGQVICSLTPHV----------------PF---KLVSTYKNYYSLVLDSALDRESVSAY 421

  Fly  1244 MLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEG 1308
            .|: .|..|.|.|.|....:|.|.|.|||||||.|.:..|.|.:.|....|.||..|...|||..
Human   422 ELV-VTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ 485

  Fly  1309 LNGDVYYSLAKGNEAGQFNLDS------ATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSN 1367
            .|..|.|||.: ...|:..|.|      .:|::...:.||.|..|:....|.|:||.:. ||.||
Human   486 KNALVSYSLVE-RRVGEHALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVP-PLGSN 548

  Fly  1368 ASITIVVLDENDNAPEFTQS---SSEVSVLETSP----TGTELMRFRASDADQGVNSQVVFSI-- 1423
            .::.:.|||||||||....:   |:..:|.|..|    .|..:.:.||.|||.|.|:.:.:.:  
Human   549 VTLQVFVLDENDNAPALLATPAGSAGGAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQP 613

  Fly  1424 SAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPI 1488
            :|......||:...||.:...:.||..|...:.|.:...|.|.|:|::|                
Human   614 AAVGAHIPFHVGLYTGEISTTRILDEADAPRHRLLVLVKDHGEPALTST---------------- 662

  Fly  1489 FPSTAIVRQIKEG-IPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHT 1552
              :|.:|..::.| .|..:...:|.|.||::.|                                
Human   663 --ATVLVSLVENGQAPKTSSRASVGAVDPEAAL-------------------------------- 693

  Fly  1553 LREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIV-EDINDNAPVFVSMNAAILPPKFSTS 1616
               :|   |:.:.:..:..         :|:..::|::: ..:..:||..||..|...|....:|
Human   694 ---VD---INVYLIIAICA---------VSSLLVLTLLLYTALRCSAPPTVSRCAPGKPTLVCSS 743

  Fly  1617 KGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQE---------- 1671
            ...|.:..|...:...|:.         |.|:        |.::.|:|..|..:|          
Human   744 AVGSWSYSQQRRQRVCSAE---------SPPK--------TDLMAFSPSLQLSREDCLNPPSEPR 791

  Fly  1672 -----VRYQLTLKSTDEAVQSERRSSEVYIT---IITPGSGGSE-------SSVPQFEQRSKLSG 1721
                 .||..:|::        ...|.|::.   |:..|.||.:       |:.|:.|     :|
Human   792 QPNPDWRYSASLRA--------GMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPE-----AG 843

  Fly  1722 SVYENEPIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILS-----TAAELD 1781
            .|  :.|:|..:     :..|...:|...|...:|. |::...|.|.....|:|     |.:::|
Human   844 EV--SPPVGAGV-----NSNSWTFKYGPGNPKQSGP-GELPDKFIIPGSPAIISIRQEPTNSQID 900

  Fly  1782 REAGPEEYEVEVYAIALGGQPRTSRTK 1808
            :..          .|..|.:..|.:.|
Human   901 KSD----------FITFGKKEETKKKK 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637
Cadherin_repeat 603..704 CDD:206637
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:394985
Cadherin 950..1026 CDD:394985 20/80 (25%)
Cadherin_repeat 1053..1149 CDD:206637 36/99 (36%)
Cadherin_repeat 1157..1274 CDD:206637 29/116 (25%)
Cadherin_repeat 1282..1380 CDD:206637 36/103 (35%)
Cadherin_repeat 1390..1485 CDD:206637 25/100 (25%)
Cadherin_repeat 1497..1597 CDD:206637 11/101 (11%)
Cadherin_repeat 1621..1699 CDD:206637 14/95 (15%)
Cadherin_repeat 1720..1818 CDD:206637 19/94 (20%)
Cadherin_repeat 1827..1918 CDD:206637
Cadherin_repeat 1926..2023 CDD:206637
Cadherin_repeat 2031..2162 CDD:206637
Cadherin_repeat 2172..2274 CDD:206637
Cadherin_repeat 2282..2380 CDD:206637
Cadherin_repeat 2388..2487 CDD:206637
Cadherin_repeat 2495..2592 CDD:206637
Cadherin_repeat 2600..2694 CDD:206637
Cadherin_repeat 2710..2806 CDD:206637
Cadherin_repeat 2814..2909 CDD:206637
Cadherin_repeat 2917..3009 CDD:206637
Cadherin 3018..3114 CDD:394985
Cadherin 3129..3220 CDD:394985
Cadherin_repeat 3233..3330 CDD:206637
Cadherin_repeat 3338..3434 CDD:206637
Cadherin_repeat 3443..3541 CDD:206637
Cadherin_repeat 3550..3647 CDD:206637
Cadherin_repeat 3657..3753 CDD:206637
EGF 4017..4047 CDD:394967
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:395008
LamG 4428..4543 CDD:238058
PCDHA12NP_061726.1 Cadherin_2 30..111 CDD:462413
Cadherin_repeat 137..238 CDD:206637 27/100 (27%)
Cadherin_repeat 246..346 CDD:206637 36/99 (36%)
Cadherin_repeat 354..451 CDD:206637 29/116 (25%)
Cadherin_repeat 459..561 CDD:206637 36/103 (35%)
Cadherin_repeat 581..670 CDD:206637 25/106 (24%)
5 X 4 AA repeats of P-X-X-P 734..885 35/188 (19%)
Cadherin_tail 791..907 CDD:435046 28/146 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 818..941 26/123 (21%)
Blue background indicates that the domain is not in the aligned region.

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