DRSC/TRiP Functional Genomics Resources

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Protein Alignment ft and Cad89D

DIOPT Version :9

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster


Alignment Length:2302 Identity:531/2302 - (23%)
Similarity:842/2302 - (36%) Gaps:584/2302 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1725 ENEPIGTSILTVTAHL----------ASAEIEYF------VTNVTATGSRGQVDRLFDIDA---- 1769
            |:..:|..||.:.|:.          ||.:.:||      .|.:..:.:| .::||.|.|.    
  Fly    80 EDAQVGKEILRLQAYPRSTAALKGADASGDHKYFNLTEHNATTLVVSLAR-SLERLVDRDVPRNL 143

  Fly  1770 -KLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVS 1833
             |..||....:...|.|                   |...:.|.:.|.||:.|:||:.|:|.:|.
  Fly   144 LKFRILCAGKQEKLEEG-------------------SYLSITVYIEDVNDNAPEFLNVPYVVDVD 189

  Fly  1834 EDLQIGHTI-STLRAHD---PDTLGSVTFLLM---------DGHDGKFLLEPSTGKLILNDTLDR 1885
            |:..|...| ..::|.|   |:|..|.....|         ||.....|..|....|||...||.
  Fly   190 ENTSIESIIFEGVQAFDRDKPNTPNSEVHFSMSTVPEQLSADGSPYFALKSPHRPLLILKRELDF 254

  Fly  1886 ETK-SKYELRIRVSD-GVQYTEAYA--TIQVSDTNDNPPLFEDTVYSFDIPE-NAQRG------- 1938
            :.. .:::|.|...| |....:|..  ||.|.|.:|.||.|.:.||...|.| ....|       
  Fly   255 DNGIRQFKLPIFAWDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPL 319

  Fly  1939 YQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEV----QHYILIVQA 1999
            |....|:|.|.| ..||.|.|.::|.....:|.:||..|::.|...:|.||.    ..::|.::|
  Fly   320 YFAPPIMAFDQD-SLNASLVYDIISGNERQLFRVNPHNGVMYLQKEIDLEEESLPGNTFVLQLEA 383

  Fly  2000 QDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEY 2064
            :....|.......:...|||||||.|.|:...|:..:.||:|....|:.|:|.|.|.|.|....|
  Fly   384 RQKDNPLKKALARIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLY 448

  Fly  2065 S-ITAGDVDSEFGIDSNG---TIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKY 2125
            : :...|....|.|||..   |:|..|.||||.|.:..|.|.|.:     .:.|.|::..||.. 
  Fly   449 NLVETKDAAGAFRIDSRTGWITVRDDRLLDREQRRSIQLNVEALE-----RNPSYLDDKHLKKP- 507

  Fly  2126 RSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISAN--ETAIMENVAINTVVIAV 2188
             .|.|.|                  |::|:|  |.||..|.|...|  |..:..|.....|:..|
  Fly   508 -GPSKVQ------------------VEITLL--DTNDNTPKFEHGNLYEFKVPINAPTGYVIGQV 551

  Fly  2189 KAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDR 2253
            .|.|.|||.||::.|.::..:.     |..:||.|:..:|.:.|...|   .|....:.:.|.|:
  Fly   552 VAHDPDEGPNGHLLYELQRPKG-----SGYIPFRLDNKNGTIYVGGPL---RRGRIAVFVEATDQ 608

  Fly  2254 GEPPQSTESQLLIRILDE----NDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIR 2314
            ...|......|.:..::.    :|.:..|....|...|..|..:|..|.||..|.:.||.: .|.
  Fly   609 PTNPSERRFSLAVITIEVYATIDDQAIDFVGAPYEFWVGANTPLGTSVGQVRTTLIYEGGD-EIM 672

  Fly  2315 YSIV-LGDQNHDFSISEDTGVVRVAKNLN--------YERLSRY----------------SLTVR 2354
            |.:: ...:...|:|.|.:|::.|.:.|:        :|.::.|                .||..
  Fly   673 YDLLHTYSEGVPFAIEERSGIITVIRELSEFKRKVYQFEAVANYLFANSSQSLVMSRSSSPLTTI 737

  Fly  2355 AEDCALENPAGDTAELTINIL--------------DINDNRPTFLDSPYLARVMENTVPPNGGYV 2405
            |....|.:.......|||:|:              :||.|...|       .|.||.|....|.:
  Fly   738 ASPAELSDEGVLITNLTIHIVNKPEQKVPLRPVIEEINMNVIHF-------HVEENVVGGIIGQL 795

  Fly  2406 LTVNAYDADTPPL--------------------------------------------NSQVRYFL 2426
            |..|..:.....|                                            |.::||.:
  Fly   796 LYKNGINLVNNELGTYREMPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYII 860

  Fly  2427 KEGDSDLFRIN-ASSGDIALLKPLDREQQSEYTLT-LVAMDTGSPPLTGTGI--VRVEVQDINDN 2487
            ......:.:|: ...|.:..|..||||||..|.|| :|...||.  ::|.||  |.::|.|:|||
  Fly   861 ANQQEVVNKISITEDGTLLTLTGLDREQQPSYELTVIVEYSTGL--VSGAGIYQVNIKVDDVNDN 923

  Fly  2488 DPVFELQSYHATVRENLPSGTHVLTPRA---TDKDEGLNAKLRFNLLGEHMHRFHIDSETGEIST 2549
            .|.|...:|...:.||...||.:....|   .|.|||.||:.|..|.|::...|.|:...|..|.
  Fly   924 APKFNALTYVGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSE 988

  Fly  2550 ATT-------------------------------------------------------LDREETS 2559
            .:|                                                       ||||:..
  Fly   989 NSTHHKMPSTTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTGKRGLDREKQQ 1053

  Fly  2560 VYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLD 2624
            :|:|.::|.|   |...:...:||:.|:|||||.|.|          ||||    ||....|::.
  Fly  1054 LYNLKIIAAD---TGGLSGYAHLTVLVADVNDNAPMF----------ERIS----VFKDSRLEIR 1101

  Fly  2625 DGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAE 2689
            :       ||   .|...:.:.:.:|:.:.:   .|.........|.|..|.....::..|..|.
  Fly  1102 E-------YT---TDMEIYFVESSSGMTAPQ---ATAAMMLAPPPYHIPGSPRFNVDRERSVGAG 1153

  Fly  2690 LTVILRPPELFPTFAYMANSH-------------FAMSEDVRPGKMITKVSATSPKKGLVGKIRY 2741
            |.|:.|           |.|.             ||:.||...|..:.::||:....|....:.|
  Fly  1154 LGVVAR-----------AKSRRRMVRALTTKCPLFAIYEDTPVGTKVLQLSASDEDFGKNALLHY 1207

  Fly  2742 AIAGGIMGDSLRVDPNSGLLSV------------GQDGLDYELTHLYEIWIEAADGDTPSLRSVT 2794
            .    :.|:.:...|...:|.|            |:..::|.|:...||.:.....|...|:..|
  Fly  1208 E----LQGEQVERTPGMPMLRVHGVKYFAIDKLSGELSVNYPLSANIEIMLNLTVTDIDGLKDST 1268

  Fly  2795 LITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEI 2859
            .:...|.|.|::||..::..|:.:..|.|....::..:.|.|.|.|:|.|:.|.| :|....|.|
  Fly  1269 CLRFTVMDVNNHAPTFKKSWYSFDTPEGEYKDSVLGQLTAIDMDFGENANITYTL-SDSHLPFTI 1332

  Fly  2860 -TESGEIYTRMRLDREEIGDYAFVVEAVDQG--VPHMTGTASVLLHLLDKNDNPPKF------TR 2915
             ..||.:....:||||....|:|.|.|.|..  :..|:.:..|.:::||.|||.|:|      |:
  Fly  1333 KPASGVLKIGGQLDRELKDKYSFQVIATDNAPVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTK 1397

  Fly  2916 ----------------LFSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFS----ENPGEKFR 2960
                            ::...:..:.:.|:||.::|:.|.|...|.|....:|    |.....|:
  Fly  1398 AVKFIPSVADRTLMLPVYKAYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYSIRHQEMQAPLFQ 1462

  Fly  2961 IEPQSGNITVAGHLDREQQDEYI-LKVVASD---GAWRAETPITITIQDQ--ND----------- 3008
            |:.:.|.|:....::.....|:: :.|:|||   .|..|...:.:.:|.|  .|           
  Fly  1463 IDSRDGTISTISRINGYNDYEHLNVSVIASDVGSPALSATAIVIVNLQGQAVTDPPKSTPKPEPP 1527

  Fly  3009 -NAPEFEHSFYSFSFPELQQSIALVGQI----------------IATDRDKQGPNSVISYSLQQP 3056
             |...|:|::|.....|..::...|.::                :....|:...:....|..:. 
  Fly  1528 ANVTVFQHAYYEVKLTENNEAPIEVMRLNLSAGLNPENYRWSLWLEEGLDETDAHPPFEYDAKN- 1591

  Fly  3057 SPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPL-YSECLVNINIVDAHNN 3120
            ..::::.|...|..|:..:|.:..:..|...|...::....|.....| .:||.:.::|.|.::|
  Fly  1592 MLLYALKPFDREHISRYQLRIRADRLSREARNYARVSYPVVDERIEGLSLNECRILVHIADENDN 1656

  Fly  3121 PPKF--EQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTN-EMDYSLMTFNLSSIFSVGRHDGWIT 3182
            .|||  .....:|.|||.|..|..:.||.||| .|.|.| |:.|.|:. ..:.:|.:....|.|.
  Fly  1657 APKFRGNGQPIVAVLPQSASFGYPVTRVEAND-LDEGLNAEIRYRLLN-EPARLFGIDELSGNIR 1719

  Fly  3183 LVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGST 3247
            |:..:....:. |...|:||||   ..:|:.|..|             ||.:..|:.|.:.|  .
  Fly  1720 LLGELSRTEHI-YGFDVKATDR---MGADDGRSGI-------------VNVFVYIINEAKQV--R 1765

  Fly  3248 ILTVG--------------ATDDDTGPNGMLRY--SISGGNERQD----FSVDERTGGIVIQQQL 3292
            ::..|              |..|..|.:..:|.  ..|||.|...    ::||..|..|:..:||
  Fly  1766 LVVAGMPVEVERRIEGLMEALSDAIGKDVRVRLLEPYSGGLEPATNAYIYAVDPHTNSIMEMEQL 1830

  Fly  3293 DYDL--IQEYHLNITVQDL-GYHPLSSVAML------------------------TIILTDVNDN 3330
            ...|  :|...|.:..|.| |..|:..:..|                        |::|..:...
  Fly  1831 QDALAGLQLDALQLQQQKLDGGKPMPRILELAEFGQLARPAHASASSFMGGLEFVTVVLLALISL 1895

  Fly  3331 PPVFNHKEYHCYIPENKPVGTFVFQAHAA-----------------------------DKDSPKN 3366
            ..:.....|.|...:.:......|.|..|                             .|.|..:
  Fly  1896 GALIAACCYVCMRQKRRLWSQRDFSASDAGLTYTIAGIGSPRGQKQRRQRQQRHTQRCSKGSTGS 1960

  Fly  3367 AIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRI-YTLQIKAKNPDSSMESYAN------ 3424
            .....||:|..       :..|..|.|:|.:.:..|::: :..|.:|.........|.|      
  Fly  1961 QRPTSAFMPES-------VCSSAQTQSTATATEKLEQQLHHHHQQQAMATQQQHHQYLNEQQRQQ 2018

  Fly  3425 --LYVHV---------------------LGVNEFYPQF--LQPVFHFDVSETSAVGTRVGAVQAT 3464
              .|:.|                     :|...|..::  .|||.:.:..|||     :.::.:|
  Fly  2019 KREYIDVPLPKSIAKAAAVTSGGDGAVGVGSTPFVLKYNACQPVNNLNNYETS-----LFSLHST 2078

  Fly  3465 DKDSG----EDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNY-GSIRG 3524
            .:|||    ....:|.....|....|.:...||.:: ..||.....:.|...|..:..| .|:: 
  Fly  2079 GQDSGVEFLSSRELYETSPDSFQHGGSKRGNNTEVL-CPRHAKAHLELRQPNTDSSDTYEDSLK- 2141

  Fly  3525 NDTDEAQVIISIQDGN-------DPPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFS 3582
              |||..|..:.:..|       ..|....||..:...:.:.|....:.||   .|:..|:.|.|
  Fly  2142 --TDEPLVAHNCRSANCEHRQHQQHPSHHPHYQNTRFEKRSCVRHSFSGVK---DDLMQQSPQIS 2201

  Fly  3583 -----YSIING---------NLKQSFK 3595
                 :::.|.         ||:|||:
  Fly  2202 LRPRGHALRNSMNDLEQRLHNLEQSFR 2228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637
Cadherin_repeat 603..704 CDD:206637
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:278457
Cadherin 950..1026 CDD:278457
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637 23/113 (20%)
Cadherin_repeat 1827..1918 CDD:206637 30/107 (28%)
Cadherin_repeat 1926..2023 CDD:206637 31/108 (29%)
Cadherin_repeat 2031..2162 CDD:206637 39/134 (29%)
Cadherin_repeat 2172..2274 CDD:206637 24/105 (23%)
Cadherin_repeat 2282..2380 CDD:206637 30/136 (22%)
Cadherin_repeat 2388..2487 CDD:206637 33/146 (23%)
Cadherin_repeat 2495..2592 CDD:206637 35/154 (23%)
Cadherin_repeat 2600..2694 CDD:206637 19/93 (20%)
Cadherin_repeat 2710..2806 CDD:206637 24/120 (20%)
Cadherin_repeat 2814..2909 CDD:206637 30/97 (31%)
Cadherin_repeat 2917..3009 CDD:206637 24/113 (21%)
Cadherin 3018..3114 CDD:278457 15/112 (13%)
Cadherin 3129..3220 CDD:278457 30/91 (33%)
Cadherin_repeat 3233..3330 CDD:206637 28/143 (20%)
Cadherin_repeat 3338..3434 CDD:206637 22/154 (14%)
Cadherin_repeat 3443..3541 CDD:206637 24/109 (22%)
Cadherin_repeat 3550..3647 CDD:206637 13/60 (22%)
Cadherin_repeat 3657..3753 CDD:206637
EGF 4017..4047 CDD:278437
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:278483
LamG 4428..4543 CDD:238058
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 30/106 (28%)
Cadherin_repeat 325..407 CDD:206637 25/82 (30%)
Cadherin_repeat 416..524 CDD:206637 40/134 (30%)
Cadherin_repeat 534..626 CDD:206637 24/99 (24%)
Cadherin_repeat 641..>714 CDD:206637 19/73 (26%)
CA 851..925 CDD:214520 27/75 (36%)
CA 1026..1085 CDD:214520 17/61 (28%)
Cadherin_repeat 1177..1280 CDD:206637 24/106 (23%)
Cadherin_repeat 1289..1385 CDD:206637 30/96 (31%)
Cadherin_repeat 1414..1510 CDD:206637 21/95 (22%)
CA 1576..1658 CDD:214520 15/82 (18%)
Cadherin_repeat 1666..1760 CDD:206637 33/112 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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