DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ft and Cad86C

DIOPT Version :9

Sequence 1:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster
Sequence 2:NP_001247033.1 Gene:Cad86C / 41302 FlyBaseID:FBgn0261053 Length:1949 Species:Drosophila melanogaster


Alignment Length:2265 Identity:451/2265 - (19%)
Similarity:777/2265 - (34%) Gaps:694/2265 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1728 PIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVE 1792
            |||..:..:||:                       ||..|...:|||.          |...:  
  Fly   107 PIGPWLGAMTAY-----------------------RLLTISLLIGILC----------PHHVQ-- 136

  Fly  1793 VYAIALGGQPR-TSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSV 1856
                  |..|: ...|::|:.:                  |..|.|:...|..|||.|.:....:
  Fly   137 ------GADPKFDPTTRMRLVL------------------VPADAQVNSVIYRLRATDEEFDYPL 177

  Fly  1857 TF-LLMDGHDGKFLLE--PST-------GKLILNDTLDRETKSKYELRIRVSDGVQYTEAYATIQ 1911
            || .:.|.......:|  |.|       ..::|...|  |....|:.::.|.|    |:...|.|
  Fly   178 TFEFVGDASASTVKVESLPCTKYNSVCQANIVLQRRL--EPGRYYDFQVSVKD----TKGGMTTQ 236

  Fly  1912 ---VSDTNDNPPLFEDTVYSFD-----IPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWAND 1968
               ::.||...|  .|.::...     |||:|:||.::..::||...|.|...    .:..|.:.
  Fly   237 LCSITATNFTTP--HDLIFPHKPGIIMIPEDAKRGTELDYVIARKNPLFQKPV----YLELWGSP 295

  Fly  1969 VFSLNPQ-------TGMLTLTARLDYEEVQHYILIVQAQD----NGQPSLSTT-ITVYCNVLDLN 2021
            :|::..:       .|.:.|...||:|:...|.|.:.|.|    .||.|.:.. :.:...|.|:.
  Fly   296 LFAIRQKIVSSETTEGTVFLLGPLDFEKQAMYHLTILANDAYAEPGQDSRNIAGMEIVVIVQDVQ 360

  Fly  2022 DNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITA--GDVDSEFGI-DSNGTI 2083
            |..|:|......:::...:....:::.|.|:|.|.||...:.|.:.:  ....|.|.| :::|.|
  Fly   361 DQPPVFTSAPPVTKLPPGILPGDKILQVHAEDGDKGNPREVRYGLVSENNPFTSFFDINETSGEI 425

  Fly  2084 RTRRNLDREHRSTYT-----LTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQK 2143
            ...|.|:.....|:.     |||.|             ||.:                  :...:
  Fly   426 FLMRPLEDIAFITHVGDPVLLTVIA-------------EEVK------------------VGRDE 459

  Fly  2144 QQRLSSTVKVTILIKDVNDEVPVFISANETA-IMENVAINTVVIAV-----KAVDNDEGRNGYID 2202
            ...|:|||::...:.|..:..|.|.:.:..: :.||....|.:..|     :..|:|.|:||...
  Fly   460 PPALASTVQLAFFLPDRTNSPPYFENDHYVSRVDENAPHGTALTFVDPYVPRVYDDDTGKNGVFS 524

  Fly  2203 YLMKEARDEDMGQSDPLPFSLNPTDGQ------LRVVD--ALDRELRSSYLLNITARDRGEPPQS 2259
            ..:.....         .|.::|...:      :||.|  .||.|.:.|....|.|::.|  |.:
  Fly   525 LTLLNNNG---------TFEISPNVAERSAGFLIRVRDNSMLDYEQQQSVQFQILAQELG--PAT 578

  Fly  2260 TESQLL---IRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGD 2321
            ..|.|:   :.|.|.|||:|||:...||..:.||.:.|..|:||.|||.|.|..|::||:.:||.
  Fly   579 NLSALVNVTVYINDVNDNAPVFEQPAYSVELPENMTAGTKVVQVLATDPDSGLGGKVRYTAILGY 643

  Fly  2322 QNHDFSISEDTGVVRVAKN---LNYERLSRYSLTVRAEDCALENPAGDTAE--LTINILDINDNR 2381
            .|...::..:||::.|:.|   .:.|.:..|.|.|.|.|...|   |:.|:  |.|.::|:||..
  Fly   644 LNTSLNLDAETGLITVSTNKHGFDREVMPEYHLYVEARDMDGE---GNRAQVPLIIKLIDVNDET 705

  Fly  2382 PTFLDSPYLARVMENTVPPNGGYVLT--VNAYDADTPPLNSQVRYFLKEGDSD-LFRINASSGDI 2443
            |.| |......::.:.:.   |:..|  ::|.|.|....|::|||.:..|:.| .|.::..:|::
  Fly   706 PIF-DKDLYEFILTHDLM---GFTTTAVIHAEDKDATAPNNEVRYEIINGNYDNQFVLDKVTGEL 766

  Fly  2444 ALLKPL------------------DREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPV 2490
            .:.:.:                  |.|....:.||..|.|.|.|....|..:|           |
  Fly   767 TVREKIHLRSKKNAKTRRRRQAGSDDEDTDIFILTARAYDLGVPVRFSTTTIR-----------V 820

  Fly  2491 FELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHI-----DSETGEISTA 2550
            :..:|...:|:..:|.  |  .|.....:|.|:|     |.|..::..:|     |....:...|
  Fly   821 YPPESRKRSVKFVVPG--H--NPDKAKTEETLSA-----LSGGKVYIHNIRPLSPDEPGAKDIPA 876

  Fly  2551 TTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFV 2615
            .....:|.||...|::...||:           :.:|::...:...:::                
  Fly   877 GNPGIKERSVVTATVIYDSSSV-----------VDISEIQQRLSHHNNS---------------- 914

  Fly  2616 FGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQG 2680
                             |.|..:|         |....|...|:|:.|:.:.:.:.::|      
  Fly   915 -----------------YAIMPQD---------TSSTDTLTPLQTQYKAENKVLFWLLI------ 947

  Fly  2681 EQSLSSKAELTVILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAG 2745
              .|::...||:::.   |..........:.|.:      |.|..:|.|.....||.:   .:|.
  Fly   948 --LLATLVALTILIL---LLCCICSWCPLYGAAT------KRIVNISRTEDDVHLVHR---EMAN 998

  Fly  2746 GIMGDSL--------------------RVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSL 2790
            |....|:                    |..|.......|::.||.::....:|    .:||...:
  Fly   999 GKQTKSVQVAEWMGRRDAWSAEKPPDTRTKPTRWEFHDGREQLDEDVGRGQDI----GEGDRRHI 1059

  Fly  2791 RSVTL----------------ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRD- 2838
            :|...                :.||..::..|. :.::.:|..:|:|              :|| 
  Fly  1060 QSAEEQQRRVRIKHNRTAKDDLHLNFHNSRTNL-INDRDVYMEDVIE--------------NRDL 1109

  Fly  2839 SGDNGNVIYRLQNDFDGTFEITESGEIYTRMRLDREEIG---DYAFVVEAVDQGVPHMTGTASVL 2900
            :||..::                     ||.|::|:|..   .|...|..:|..        |:.
  Fly  1110 AGDREHI---------------------TRTRVNRQEYARRKQYDSEVRHIDDD--------SMR 1145

  Fly  2901 LHLLDKNDNPPKFTRLFSLNVTE-------NAEIGSFVIRVTSSDLDLGANANASYSFSENPGEK 2958
            .|.:|:..:....|...||....       |.||...:.|..:.|   |.|.:....:...|   
  Fly  1146 RHEIDRGSDIDFNTAHNSLKSKRELFIKDGNVEILQLMTRDKTRD---GLNLDDDNIYVNVP--- 1204

  Fly  2959 FRIEPQSGNITVAGHLDREQQDEYILKVVASDGAWRAETPITITIQDQNDNAPEF-EH------S 3016
              ::|       ||:|...|     |.:|.:.|   .|..:...|::|.|..... ||      :
  Fly  1205 --LKP-------AGNLSHPQ-----LLMVDNTG---KEILMRRFIEEQPDGKQIIREHYQIVPGA 1252

  Fly  3017 FYSFSFP-ELQQSIALVGQIIATDRDKQGPNSVISYSLQQP-------SPM-----FSIDPATGE 3068
            .|..|.| |:||...|.|.....  .|.||||:: ||..:|       .|:     .|:|.....
  Fly  1253 TYIQSMPNEVQQGSTLKGDTFPL--GKSGPNSIV-YSQLEPEVKVIHTQPVQAGEGVSLDQQMQP 1314

  Fly  3069 VFSKKAV--RFKHSQYVRSP------------ENMYALTVLATDNGKPPLYSECLVNINIVDAHN 3119
            ..|.:::  ..:||...::.            ||.|....:|.:....|..|..:......||..
  Fly  1315 AVSNQSLTHELEHSLKQQNALLRQILMEKEKLENAYTQHEVALETQSLPGQSMAIGTQTDCDAGT 1379

  Fly  3120 NPPKFEQAEYLAPLPQDAVRGQRI-----VRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDG 3179
            ....|           |.|....|     .|..|..:.|...:|..|..:.||            
  Fly  1380 QTEGF-----------DGVLDPEISLAKPSRRRARSENDESMSEDGYEYVRFN------------ 1421

  Fly  3180 WITLVKPIQVPPNTR---YELVVRATDRGVPPQSDETRVVIV-VTGENMDTP---RFSVNSYQVI 3237
                      |||:.   |.:..|.|.:  .|:....|:|:| .....:.||   ...|...:..
  Fly  1422 ----------PPNSPEGVYWIKRRRTKK--RPRQPRKRIVMVEEVKRKIRTPIKEEEEVQERKKR 1474

  Fly  3238 VPENEPVGST---ILTVGATDD---DTGPNGMLRYSISGGNERQDFSVDERTGGIVIQQQLDYDL 3296
            ||..:|:..|   ||....:|:   |...||   .|.:|...|.:.....|...:.|...:|   
  Fly  1475 VPPKKPLRETKTSILRKQLSDESRKDQSRNG---ESQTGNRHRSESDSHNRDMFMEITDSMD--- 1533

  Fly  3297 IQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADK 3361
                    .:...|.|.:..:.:           ...:.|.:           |.|       |:
  Fly  1534 --------ELASPGSHSIRKIQV-----------EKYYKHSD-----------GDF-------DE 1561

  Fly  3362 DSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLY 3426
            |..:.:|                  .|:|.               .:.|:...|..:.|      
  Fly  1562 DDTEYSI------------------DSDGD---------------EIVIRTNYPSRAQE------ 1587

  Fly  3427 VHVLGVNEFYPQ----FLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGF 3487
                  ||.|.:    :.:|        .:.|..:..|.:::..||..:. :..|....|:.:|.
  Fly  1588 ------NERYRRQERTYAEP--------ENPVDRKRPARKSSPTDSQPEA-MPRLSRRDSSKRGS 1637

  Fly  3488 RIDTNT----GLIYVARHLDRETQN-RVVLTVMAKNYGSIRGNDTD-----EAQVIISIQDGNDP 3542
            |..|::    ..:.::::....|:| |.:::...:..||.| :.||     |.::.....:..:.
  Fly  1638 RKQTSSEPPHNRVSISKYESTVTENGRKLMSTSTEIVGSKR-SLTDRSYQSETELAGLEHEERNV 1701

  Fly  3543 PEFIKHYY----------TSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKID 3597
            |::::.||          |||.|..:...:|        |.|.....:.|.:.|....|...:.|
  Fly  1702 PKYMEWYYNKKKSSVSGRTSTESSKSQPSSK--------KKVGAAEKRVSKTRITAQPKDVEEYD 1758

  Fly  3598 VQTGEIS----------TASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFT 3652
            ...|...          ..|||.:|:.        |::....|:..:.|.|..|:.         
  Fly  1759 ETGGRYKPEPAPRKSPPKGSRLLKEDR--------ALNKQHKPKIETDTNHPLLQH--------- 1806

  Fly  3653 PEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFT--YQLIGGKHKSWLSVDRNSGVVRSTTSF 3715
                    ||:.....:.:.:.|:...||....|.|  :...|||       :..||....|:..
  Fly  1807 --------SEHRFERENALEVPAAPTKLPHYMYPETPPHAAAGGK-------ESKSGRESKTSKE 1856

  Fly  3716 DR-EMTPILEAIIEVEDS---------GKPKQKSQHLLTITVLDQNDNPSTTRSL 3760
            .: :.:||.|..::|.:|         |.|.||  .|...|:.|.:|:.....||
  Fly  1857 AKPKPSPIRENEVKVSNSKIYVEHRGTGHPTQK--QLNASTLEDDHDSGIAMNSL 1909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637
Cadherin_repeat 603..704 CDD:206637
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:278457
Cadherin 950..1026 CDD:278457
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637
Cadherin_repeat 1282..1380 CDD:206637
Cadherin_repeat 1390..1485 CDD:206637
Cadherin_repeat 1497..1597 CDD:206637
Cadherin_repeat 1621..1699 CDD:206637
Cadherin_repeat 1720..1818 CDD:206637 16/90 (18%)
Cadherin_repeat 1827..1918 CDD:206637 25/103 (24%)
Cadherin_repeat 1926..2023 CDD:206637 26/113 (23%)
Cadherin_repeat 2031..2162 CDD:206637 26/138 (19%)
Cadherin_repeat 2172..2274 CDD:206637 27/118 (23%)
Cadherin_repeat 2282..2380 CDD:206637 36/102 (35%)
Cadherin_repeat 2388..2487 CDD:206637 23/119 (19%)
Cadherin_repeat 2495..2592 CDD:206637 20/101 (20%)
Cadherin_repeat 2600..2694 CDD:206637 12/93 (13%)
Cadherin_repeat 2710..2806 CDD:206637 21/131 (16%)
Cadherin_repeat 2814..2909 CDD:206637 18/98 (18%)
Cadherin_repeat 2917..3009 CDD:206637 21/98 (21%)
Cadherin 3018..3114 CDD:278457 28/122 (23%)
Cadherin 3129..3220 CDD:278457 20/99 (20%)
Cadherin_repeat 3233..3330 CDD:206637 18/102 (18%)
Cadherin_repeat 3338..3434 CDD:206637 10/95 (11%)
Cadherin_repeat 3443..3541 CDD:206637 18/107 (17%)
Cadherin_repeat 3550..3647 CDD:206637 22/116 (19%)
Cadherin_repeat 3657..3753 CDD:206637 25/107 (23%)
EGF 4017..4047 CDD:278437
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:278483
LamG 4428..4543 CDD:238058
Cad86CNP_001247033.1 Cadherin_repeat 260..361 CDD:206637 26/104 (25%)
Cadherin_repeat 372..469 CDD:206637 25/127 (20%)
Cadherin_repeat 487..596 CDD:206637 27/119 (23%)
Cadherin_repeat 605..703 CDD:206637 35/100 (35%)
Cadherin_repeat 728..820 CDD:206637 21/102 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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