Sequence 1: | NP_477497.1 | Gene: | ft / 33627 | FlyBaseID: | FBgn0001075 | Length: | 5147 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_999974.1 | Gene: | cdh23 / 407978 | ZFINID: | ZDB-GENE-040513-7 | Length: | 3366 | Species: | Danio rerio |
Alignment Length: | 3804 | Identity: | 1032/3804 - (27%) |
---|---|---|---|
Similarity: | 1597/3804 - (41%) | Gaps: | 792/3804 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 469 QGTPARTTTAHLIID------VNDVNDHEPV-FEKSEYSAVL--SELAPTGSFVASITATDEDTG 524
Fly 525 VNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVII 589
Fly 590 LDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQ-FALD 653
Fly 654 ALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLA 718
Fly 719 DDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGG-EGLFQLDARSGAISLRGDAPAS 782
Fly 783 MHWKPHYK----LLVSARDAGQRRSQQDAIV----EIVLKSKLEMLECGQAQAGGYEFQMVEDHE 839
Fly 840 QQRNSQPNR-------EVGI-----VQVKSTNGKANSHIEYDIIQGDRAQNFRIDTRSG------ 886
Fly 887 RITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPT 951
Fly 952 ISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQFRIGPVTGVLYLQRPIRAEPGSLIH 1016
Fly 1017 VELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDN 1081
Fly 1082 GRISYEIIEGNTERMFG--VFPDGY--LFVRAPLDREE--RDYYALTVSCRDAGQPSRSSVVPVV 1140
Fly 1141 IHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGR---NAELSFTLSSQTQDFTID 1202
Fly 1203 TRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGI-PRLQDKV-KVK 1265
Fly 1266 VIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDS 1330
Fly 1331 ATGQL-SLGRRLDRESQE------IHHLIVVAKDAALKHPLSSNASITIVV--LDENDNAPEFTQ 1386
Fly 1387 SSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYED 1451
Fly 1452 ITSYTLNITASDCGT-PSLSTTVLYNVLVVDDND-NPPIFPSTAIVRQIKEGIPLKTPIVTVTAD 1514
Fly 1515 DPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSER 1579
Fly 1580 QLSTEKLVTVIVE--DINDNAPVFV--SMNAAILP--PKFSTSKGSSTAVMQVHAKDADSSSNGL 1638
Fly 1639 VTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLKSTDEAVQSERRSSEVY-ITIITPG 1702
Fly 1703 SGGSESSV-------------PQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVTA 1754
Fly 1755 TGSRGQV--------DRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRV 1811
Fly 1812 TVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAH------------DPDTLGSVTFLLMDGH 1864
Fly 1865 DGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSDGVQYTEAYATIQVS----DTNDNPPLFEDT 1925
Fly 1926 V-YSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQT---GMLTLTARLD 1986
Fly 1987 YEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIF-DPMSYSSEVFENVPIATEVVTVS 2050
Fly 2051 AKDIDSGNNGLIEYSITAGDVDSEFGID-SNGTIRTRRN-LDREHRSTYTLTVTARDCADEFASF 2113
Fly 2114 SELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISAN-ETAIME 2177
Fly 2178 NV-AINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELR 2241
Fly 2242 SS-YLLNITARDRGEPP---QSTESQLLIRILDENDNSPVFDPKQYSA--SVAENASIGAMVLQV 2300
Fly 2301 SATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYER--LSRYSLTVRAEDCALENP 2363
Fly 2364 A-GDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLK 2427
Fly 2428 EGDSD-LFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTG---TGIVRVEVQDINDND 2488
Fly 2489 PVFELQSYHATVRENLPSGTHVLTPR----ATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEIST 2549
Fly 2550 --ATTLDREETSV--YHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERIS 2610
Fly 2611 KGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVV---STKLELKTKTKSHDDLTYTI 2672
Fly 2673 VISAMDQGEQSLSSKAELTVIL------RPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSP 2731
Fly 2732 KKGLVGKIRY-------------AIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAA 2783
Fly 2784 DGDTPSLR-SVTL----ITLNVTDANDNAPVMEQL---IYNAEVLEEESPPQLIAVVKASDRDSG 2840
Fly 2841 DNGNVIYRLQNDFDGTF---EITESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLH 2902
Fly 2903 LLDKNDNPPKFTR-LFSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSG 2966
Fly 2967 NITVAGHLDREQQDEYILKVVASDGAW-----RAETPITI--TIQDQNDNAPEFEHSFYSFSFPE 3024
Fly 3025 LQQSIALVGQIIATDRDKQGPNSVISYSLQQP-SPMFSIDPATGEVFSKKAVRFKHSQYVRSPEN 3088
Fly 3089 MYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQD 3153
Fly 3154 LGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIV 3218
Fly 3219 VTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSI----SGGNERQDFSV 3279
Fly 3280 DERTGGIVIQQQLDYDLIQEYHLNITVQDLGYH-PLSSVAMLTIILTDVNDNPPVFNHKEYHCYI 3343
Fly 3344 PENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTL 3408
Fly 3409 QIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQ-ATDKDSGEDG 3472
Fly 3473 RVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRE---TQNRVVLTVMAKNYGSIRGNDTDEAQVI- 3533
Fly 3534 -----------ISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSII 3586
Fly 3587 N--------------GNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATV 3637
Fly 3638 HIELED------VNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKH 3696
Fly 3697 KSWLSVDRNSGVVRSTTS-----FDREMTPIL--EAIIEVEDSGKPKQKSQHLLTITVLDQNDNP 3754
Fly 3755 STT-----------------------------------RSLH-------IAVSLFNG------DL 3771
Fly 3772 PSNVKLADVRPNDIDIVGDYRCRLQKNPAQSQLQLAIPRACDLITTSHTTPIASVFSYTGNDGKH 3836
Fly 3837 GDVSSK-----VSVAFQSFNNETLANSVSIMVRNMTAYHFLANHYRPILEMIKSRMSNEDEVILY 3896
Fly 3897 SLLEGGSGNSTNLQLLMAVRLAKTSYQQPKYLIERLREKRSAFSELLQKEVIVGYEPCSEPDVCE 3961
Fly 3962 NGGVCSATMRLLDAHSFVIQDSPALVLSGPRVVH 3995 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ft | NP_477497.1 | Cadherin_repeat | 71..152 | CDD:206637 | |
Cadherin_repeat | 163..266 | CDD:206637 | |||
Cadherin_repeat | 275..378 | CDD:206637 | |||
Cadherin_repeat | 393..490 | CDD:206637 | 4/26 (15%) | ||
Cadherin_repeat | 498..594 | CDD:206637 | 19/97 (20%) | ||
Cadherin_repeat | 603..704 | CDD:206637 | 34/101 (34%) | ||
Cadherin_repeat | 735..814 | CDD:206637 | 22/87 (25%) | ||
Cadherin | 843..>907 | CDD:278457 | 20/81 (25%) | ||
Cadherin | 950..1026 | CDD:278457 | 19/75 (25%) | ||
Cadherin_repeat | 1053..1149 | CDD:206637 | 35/101 (35%) | ||
Cadherin_repeat | 1157..1274 | CDD:206637 | 33/121 (27%) | ||
Cadherin_repeat | 1282..1380 | CDD:206637 | 37/106 (35%) | ||
Cadherin_repeat | 1390..1485 | CDD:206637 | 33/96 (34%) | ||
Cadherin_repeat | 1497..1597 | CDD:206637 | 32/101 (32%) | ||
Cadherin_repeat | 1621..1699 | CDD:206637 | 23/78 (29%) | ||
Cadherin_repeat | 1720..1818 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 1827..1918 | CDD:206637 | 24/106 (23%) | ||
Cadherin_repeat | 1926..2023 | CDD:206637 | 35/100 (35%) | ||
Cadherin_repeat | 2031..2162 | CDD:206637 | 40/132 (30%) | ||
Cadherin_repeat | 2172..2274 | CDD:206637 | 32/106 (30%) | ||
Cadherin_repeat | 2282..2380 | CDD:206637 | 36/102 (35%) | ||
Cadherin_repeat | 2388..2487 | CDD:206637 | 31/102 (30%) | ||
Cadherin_repeat | 2495..2592 | CDD:206637 | 44/104 (42%) | ||
Cadherin_repeat | 2600..2694 | CDD:206637 | 28/96 (29%) | ||
Cadherin_repeat | 2710..2806 | CDD:206637 | 26/113 (23%) | ||
Cadherin_repeat | 2814..2909 | CDD:206637 | 30/97 (31%) | ||
Cadherin_repeat | 2917..3009 | CDD:206637 | 28/98 (29%) | ||
Cadherin | 3018..3114 | CDD:278457 | 33/96 (34%) | ||
Cadherin | 3129..3220 | CDD:278457 | 2/90 (2%) | ||
Cadherin_repeat | 3233..3330 | CDD:206637 | 31/101 (31%) | ||
Cadherin_repeat | 3338..3434 | CDD:206637 | 3/95 (3%) | ||
Cadherin_repeat | 3443..3541 | CDD:206637 | 31/113 (27%) | ||
Cadherin_repeat | 3550..3647 | CDD:206637 | 25/116 (22%) | ||
Cadherin_repeat | 3657..3753 | CDD:206637 | 17/102 (17%) | ||
EGF | 4017..4047 | CDD:278437 | |||
EGF_CA | 4056..4090 | CDD:238011 | |||
EGF_CA | 4094..4128 | CDD:238011 | |||
Laminin_G_1 | 4156..4306 | CDD:278483 | |||
LamG | 4428..4543 | CDD:238058 | |||
cdh23 | NP_999974.1 | Cadherin_repeat | 48..134 | CDD:206637 | 19/91 (21%) |
Cadherin_repeat | 142..237 | CDD:206637 | 34/100 (34%) | ||
Cadherin_repeat | 246..350 | CDD:206637 | 29/134 (22%) | ||
Cadherin_repeat | 358..460 | CDD:206637 | 26/109 (24%) | ||
Cadherin_repeat | 469..561 | CDD:206637 | 25/94 (27%) | ||
Cadherin_repeat | 570..671 | CDD:206637 | 35/100 (35%) | ||
Cadherin_repeat | 679..778 | CDD:206637 | 33/121 (27%) | ||
Cadherin_repeat | 786..890 | CDD:206637 | 37/106 (35%) | ||
Cadherin_repeat | 898..994 | CDD:206637 | 31/96 (32%) | ||
Cadherin_repeat | 1003..1102 | CDD:206637 | 33/106 (31%) | ||
Cadherin_repeat | 1110..1206 | CDD:206637 | 29/120 (24%) | ||
Cadherin_repeat | 1221..1311 | CDD:206637 | 29/102 (28%) | ||
Cadherin_repeat | 1321..1417 | CDD:206637 | 24/105 (23%) | ||
Cadherin_repeat | 1428..1526 | CDD:206637 | 35/97 (36%) | ||
Cadherin_repeat | 1536..1633 | CDD:206637 | 41/132 (31%) | ||
Cadherin_repeat | 1641..1743 | CDD:206637 | 32/108 (30%) | ||
Cadherin_repeat | 1755..1850 | CDD:206637 | 36/97 (37%) | ||
Cadherin_repeat | 1858..1958 | CDD:206637 | 31/102 (30%) | ||
Cadherin_repeat | 1966..2068 | CDD:206637 | 44/104 (42%) | ||
Cadherin_repeat | 2076..2172 | CDD:206637 | 29/101 (29%) | ||
Cadherin_repeat | 2181..2292 | CDD:206637 | 26/121 (21%) | ||
Cadherin_repeat | 2304..2401 | CDD:206637 | 30/96 (31%) | ||
Cadherin_repeat | 2410..2507 | CDD:206637 | 27/97 (28%) | ||
Cadherin_repeat | 2516..2610 | CDD:206637 | 34/103 (33%) | ||
Cadherin_repeat | 2624..2722 | CDD:206637 | 31/97 (32%) | ||
Cadherin_repeat | 2738..2849 | CDD:206637 | 31/111 (28%) | ||
Cadherin_repeat | 2858..2959 | CDD:206637 | 22/104 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 63 | 1.000 | Domainoid score | I10252 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |