Sequence 1: | NP_477497.1 | Gene: | ft / 33627 | FlyBaseID: | FBgn0001075 | Length: | 5147 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001021650.1 | Gene: | hmr-1 / 173007 | WormBaseID: | WBGene00001980 | Length: | 2920 | Species: | Caenorhabditis elegans |
Alignment Length: | 3383 | Identity: | 782/3383 - (23%) |
---|---|---|---|
Similarity: | 1222/3383 - (36%) | Gaps: | 974/3383 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1673 RYQLTLKSTDEAVQSERRSSEVYITIITPGSG----GSESSVPQFEQRSKLSGSVYE------NE 1727
Fly 1728 PIGTSILTVTAHLASAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVE 1792
Fly 1793 VYAIALGGQPRTSRTKVRVTVLDKNDSPP-------QFLDTPFVYNVSEDLQIGHTISTLRAHD- 1849
Fly 1850 ------PDTLGSVT----FLLMDGHDGKF-LLEPSTGKLILNDTLDRETKSKYELRIRVSDGVQY 1903
Fly 1904 TEAYA-TIQVSDTNDNPPLFEDTVYSF--DIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDW 1965
Fly 1966 ANDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDL--NDNAPIFD 2028
Fly 2029 PMSYSSEVFENVPIATEVVTVSAKDI----DSGNNGLIEYSI---TAGDVDSEFGID-SNGTIRT 2085
Fly 2086 RRNLDREHRS---TYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRL 2147
Fly 2148 SSTVKVTILIKDVNDEVPVFISANETA-IMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDE 2211
Fly 2212 DMGQSDPLPFSLNPTDGQLRVVDALD----RELRSSYLLNITARDRGEPPQSTESQLL-IRILDE 2271
Fly 2272 NDNSPVFDP-KQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQN-------HDFSI 2328
Fly 2329 SEDTGVVRVAKNLNYERLSR----YSLTVRAED---CALENPAGDT--AELTINILDINDNRPTF 2384
Fly 2385 LD-SPY--LARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSD---LFRINASSGDI 2443
Fly 2444 ALLKP-----LDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVREN 2503
Fly 2504 LPSGTHVLTPRATDKDEGLNAKLRFNL-----LGEHMHRFHID------SETGEISTATTLDREE 2557
Fly 2558 TSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDST---TYNVAVPERISKGEFVFGAR 2619
Fly 2620 ALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSL 2684
Fly 2685 SSKAELTVILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMG 2749
Fly 2750 DSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLI 2814
Fly 2815 YNAEVLEEESPPQ--------LIAVVKASDRDS-GDNGNVIYRLQNDFDGT----FEITE-SGEI 2865
Fly 2866 YTRMRLDREEIGDYAFVVEAVDQGVPHMTG-------TASVLLHLLDKNDNPPKF-TRLFSLNVT 2922
Fly 2923 ENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEK--FRIEPQSGNITVAGHLDREQQDEYILK 2985
Fly 2986 VVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVIS 3050
Fly 3051 YSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIV 3115
Fly 3116 DAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHAND-KQDLGTNEMDYSLMTFNLSSIFSVGRHDG 3179
Fly 3180 WITLVK------PIQVPPNTRYELVVRATD---RGVPPQSDETRVVIVVTGENMDTPRFSVNSYQ 3235
Fly 3236 VIVPENEPV---GSTILTVGAT--DDDTGPNGMLRYSISGG---NERQDFSVDERTGGIVIQQQL 3292
Fly 3293 DYDLI--QEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFV-- 3353
Fly 3354 FQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSS 3418
Fly 3419 MESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSN 3483
Fly 3484 DKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIR---GNDTDEAQVIISIQDGNDPPEF 3545
Fly 3546 IKHYYTSTISEAAPVGTKVTTVKAIDKD----VRTQNNQFSYSIINGNLKQSFKIDVQTGEISTA 3606
Fly 3607 SRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPA---GT 3668
Fly 3669 SIMTLIASDPDLPRNGGPFTYQLIGG-KHKSWLSV------DRNSGVVRST--TSFDREMTPILE 3724
Fly 3725 AIIEV-----EDSGKPKQKSQHLLTITVLDQNDNPSTTRSLHIAVSLFNGDLPSNVKLADVRPND 3784
Fly 3785 ID--IVGDYRCRLQKNPAQSQL--QLAIPRACDLITTSHTTPIASVFSYTGNDGKHGDVSSKVSV 3845
Fly 3846 AFQ-SFNNETLANSVSIMVRNMTAYHFLANHYR------PILEMIKSRMS----NEDEVILYSLL 3899
Fly 3900 EGGSGNSTNLQLLMAVRL--AKTSYQQPKYLIERLREKRSAFSELLQKEVI-VGYEPCSEPDVCE 3961
Fly 3962 NGGVCSATMRLLDAHSFVIQDSPALVLSGPRVVHDYSCQCTSGFSGEQCSRRQDPCLPNPCHSQV 4026
Fly 4027 QCRRLGSDFQCMCPANRDGKHCEKERSDVCYSKPCRNGGSCQRSPDGSSYFCLCR-PGFRGNQCE 4090
Fly 4091 SVSDSCRPNPCLHGGLCVSLKPGYKCNCTPGRYGRHCERFSYGFQPLSYMTFPALDVTTNDISIV 4155
Fly 4156 FATTKPNSLLLYNYGMQSGGR------SDFLAIELVHGRAYFS---SGGARTAISTVIAGRNLAD 4211
Fly 4212 GGWHKVTATRNGRVMSLSVAKC------ADSGDVCTECLPGDSSCYADEVGPVGTLNFN-KQPLM 4269
Fly 4270 IGGLSSADPI--LERPGQVHSDDLVGCLHSVHIGGRALNLSLPLQQKGILAGCNRQACQPALAAE 4332
Fly 4333 RCGG---------FAGQCIDRWSSS-----LCQCGGHLQSPDCSDSLEPITLGEGAFVEF----- 4378
Fly 4379 ---RISEIYRRMQLLDNLYNSKSAWL----DNQQ----------------------------MRE 4408
Fly 4409 RRAVS------NFSTASQIYEAPKMLSM------LFRTYKDQGQILYAATNQMFTSLSLR----- 4456
Fly 4457 -EGRLVYY--SKQHLTINMTVQETSTLNDGKWHNVSLFSESRSLRLIVDGRQVGDELDIAGVHDF 4518
Fly 4519 LDPYLTILNVG----GEAFV--------GCLANVTVNNELQPLNGSGSIFPEVRYHGKIESGCRG 4571
Fly 4572 DIGQDAAQVADPLSIGFTLVIVFFVILVVAILGSYVIY--RFRGKQEKI--------GSLSCGVP 4626
Fly 4627 GFKIKHPGGPVTQSQVDHVLVRNLHPSEAPSPPVGAGDHMRPPVGSHHLVGPELLTKKFKEPTAE 4691
Fly 4692 MPQPQQQQQRPQRPDIIERESPLIREDHHLPIPPLHPLPLEHASSVDMGSEYPEHYDLENASSIA 4756
Fly 4757 PSD 4759 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ft | NP_477497.1 | Cadherin_repeat | 71..152 | CDD:206637 | |
Cadherin_repeat | 163..266 | CDD:206637 | |||
Cadherin_repeat | 275..378 | CDD:206637 | |||
Cadherin_repeat | 393..490 | CDD:206637 | |||
Cadherin_repeat | 498..594 | CDD:206637 | |||
Cadherin_repeat | 603..704 | CDD:206637 | |||
Cadherin_repeat | 735..814 | CDD:206637 | |||
Cadherin | 843..>907 | CDD:278457 | |||
Cadherin | 950..1026 | CDD:278457 | |||
Cadherin_repeat | 1053..1149 | CDD:206637 | |||
Cadherin_repeat | 1157..1274 | CDD:206637 | |||
Cadherin_repeat | 1282..1380 | CDD:206637 | |||
Cadherin_repeat | 1390..1485 | CDD:206637 | |||
Cadherin_repeat | 1497..1597 | CDD:206637 | |||
Cadherin_repeat | 1621..1699 | CDD:206637 | 5/25 (20%) | ||
Cadherin_repeat | 1720..1818 | CDD:206637 | 18/103 (17%) | ||
Cadherin_repeat | 1827..1918 | CDD:206637 | 23/103 (22%) | ||
Cadherin_repeat | 1926..2023 | CDD:206637 | 22/100 (22%) | ||
Cadherin_repeat | 2031..2162 | CDD:206637 | 35/141 (25%) | ||
Cadherin_repeat | 2172..2274 | CDD:206637 | 34/107 (32%) | ||
Cadherin_repeat | 2282..2380 | CDD:206637 | 37/113 (33%) | ||
Cadherin_repeat | 2388..2487 | CDD:206637 | 34/108 (31%) | ||
Cadherin_repeat | 2495..2592 | CDD:206637 | 30/107 (28%) | ||
Cadherin_repeat | 2600..2694 | CDD:206637 | 13/93 (14%) | ||
Cadherin_repeat | 2710..2806 | CDD:206637 | 15/95 (16%) | ||
Cadherin_repeat | 2814..2909 | CDD:206637 | 35/115 (30%) | ||
Cadherin_repeat | 2917..3009 | CDD:206637 | 32/93 (34%) | ||
Cadherin | 3018..3114 | CDD:278457 | 5/95 (5%) | ||
Cadherin | 3129..3220 | CDD:278457 | 25/100 (25%) | ||
Cadherin_repeat | 3233..3330 | CDD:206637 | 29/106 (27%) | ||
Cadherin_repeat | 3338..3434 | CDD:206637 | 14/97 (14%) | ||
Cadherin_repeat | 3443..3541 | CDD:206637 | 18/100 (18%) | ||
Cadherin_repeat | 3550..3647 | CDD:206637 | 33/100 (33%) | ||
Cadherin_repeat | 3657..3753 | CDD:206637 | 30/112 (27%) | ||
EGF | 4017..4047 | CDD:278437 | 4/29 (14%) | ||
EGF_CA | 4056..4090 | CDD:238011 | 12/34 (35%) | ||
EGF_CA | 4094..4128 | CDD:238011 | 3/33 (9%) | ||
Laminin_G_1 | 4156..4306 | CDD:278483 | 45/167 (27%) | ||
LamG | 4428..4543 | CDD:238058 | 26/140 (19%) | ||
hmr-1 | NP_001021650.1 | Cadherin_repeat | 431..521 | CDD:206637 | 22/90 (24%) |
Cadherin_repeat | 534..638 | CDD:206637 | 36/142 (25%) | ||
Cadherin_repeat | 647..742 | CDD:206637 | 33/106 (31%) | ||
Cadherin_repeat | 752..861 | CDD:206637 | 37/113 (33%) | ||
Cadherin_repeat | 875..975 | CDD:206637 | 33/103 (32%) | ||
Cadherin_repeat | 983..1085 | CDD:206637 | 29/103 (28%) | ||
Cadherin_repeat | 1103..1206 | CDD:206637 | 30/201 (15%) | ||
Cadherin_repeat | 1216..1331 | CDD:206637 | 35/114 (31%) | ||
Cadherin_repeat | 1340..1432 | CDD:206637 | 32/93 (34%) | ||
Cadherin_repeat | 1443..1542 | CDD:206637 | 34/142 (24%) | ||
Cadherin_repeat | 1553..1657 | CDD:206637 | 29/103 (28%) | ||
Cadherin_repeat | 1666..1768 | CDD:206637 | 33/207 (16%) | ||
Cadherin_repeat | 1779..1868 | CDD:206637 | 33/97 (34%) | ||
EGF_CA | 2250..2283 | CDD:238011 | 12/34 (35%) | ||
LamG | 2286..2459 | CDD:238058 | 54/225 (24%) | ||
LamG | 2533..2679 | CDD:304605 | 28/149 (19%) | ||
Cadherin_C | 2812..>2919 | CDD:279398 | 27/150 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 55 | 1.000 | Domainoid score | I7413 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |