DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or24a and Or42b

DIOPT Version :10

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:408 Identity:79/408 - (19%)
Similarity:159/408 - (38%) Gaps:77/408 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ALSLIGFYPEQKRTV--LVKLWSFFNF-FILTY------GCYAEAYYGIHYIPINIATALDALCP 78
            |:..||:.|.::..:  :...|:...| :..||      |.|......  :.|....|:|.....
  Fly    27 AMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKS--FSPGEFLTSLQVCIN 89

  Fly    79 VASSILSLVKMVAIWWYQDELRSLIER--VRFLTEQQKSKRKLGYKKRFYTLATQLTFLLLCCGF 141
            ...|.:.:....::.|...:.::::::  :|....:::.|..|...:..:..   |.|..:.||:
  Fly    90 AYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAMEEREKIHLVVARSNHAF---LIFTFVYCGY 151

  Fly   142 CTSTSYSVRHLIDNILRRTHGK-DWIYETPFKMMFPDLLLRLPLYPITYILVHWHG--------- 196
            ..||      .:.::|   .|: .|....||                    :.||.         
  Fly   152 AGST------YLSSVL---SGRPPWQLYNPF--------------------IDWHDGTLKLWVAS 187

  Fly   197 ---YITVVCFVGADGFFLGFCLYFTVLLLC----LQDDVCDLLEVENIEKSPSEAEEARIVREME 254
               |:.:...|..|.....:.|.:|::|..    |::.:..|...||:    ||||.   ..|:.
  Fly   188 TLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENL----SEAES---YEELV 245

  Fly   255 KLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFS----GLGIIVYVVYTCAVG 315
            |.|..|..:......:..|:.......|:...|::|.:::::..||    |:...::|:   .:.
  Fly   246 KCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASFMFVI---TIL 307

  Fly   316 VEIFLYCLGGSHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQR-VLTIKIPFFSPSLET 379
            ::.|.:|...:.|||.|.:|..:.|.|:|...|.|.:...|..:...|: ::.|....|..|:.:
  Fly   308 LQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSS 372

  Fly   380 LTSILRFTGSLIALAKSV 397
            ..|:.:|..|:|.:.|.:
  Fly   373 NISVAKFAFSVITITKQM 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 65/343 (19%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 66/346 (19%)

Return to query results.
Submit another query.