DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or24a and Or13a

DIOPT Version :9

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:434 Identity:96/434 - (22%)
Similarity:176/434 - (40%) Gaps:73/434 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SYPMERHYFMVPKFALSLIGFYP--EQKRTVLVKLWSFFNFFILTYGCYAEAYYGIHYIPINIA- 70
            |||.:...|.:....|.|.|.:|  |..|.     |...:.....|..:  |:|.|..:.|.|: 
  Fly     4 SYPYKALSFPIQCVWLKLNGSWPLTESSRP-----WRSQSLLATAYIVW--AWYVIASVGITISY 61

  Fly    71 -TAL------------DALCPVASSILSLVKMVAIWWYQDELRSLIERVRF---LTEQQKSKRKL 119
             ||.            :..|.....:|:.|:::.:...|.:.|.|||...:   :....|:....
  Fly    62 QTAFLLNNLSDIIITTENCCTTFMGVLNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNNVAA 126

  Fly   120 GYKKRFYTLATQLTFLLLCCGFCTSTSYSVRHLIDNILRRTHGKDWIYET---PFKMMFP-DLLL 180
            ..::|..|.:...:.|.     |....|.|..|::...    |..:..:.   |:||:|| |...
  Fly   127 ECRRRMVTFSIMTSLLA-----CLIIMYCVLPLVEIFF----GPAFDAQNKPFPYKMIFPYDAQS 182

  Fly   181 RLPLYPITYILVHWHGYITVVCFVGADGFFLGFCLYFTVLLLC-----LQDDVCDLLEVENIEKS 240
            ....|.:|||...:.| |.||..:.|:...|||.:.:|    |     |...:..|....|.|. 
  Fly   183 SWIRYVMTYIFTSYAG-ICVVTTLFAEDTILGFFITYT----CGQFHLLHQRIAGLFAGSNAEL- 241

  Fly   241 PSEAEEARIVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFSGLGII 305
               ||..::.| ::::|::||.:....:||......|.||:.:.||::|  .:|...:.:|..:.
  Fly   242 ---AESIQLER-LKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLI--CMVGFQIVTGKNMF 300

  Fly   306 V-----YVVYTCAVGVEIFLYCLGGSHIMEACSNLARSTFSSHWYGHS-VRVQKMT--------- 355
            :     :::|..:...::::.|..|..:::..:..|:..:...|.|.. :.:|..|         
  Fly   301 IGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQ 365

  Fly   356 --LLMVARAQRVLTIKIPFFSPSLETLTSILRFTGSLIALAKSV 397
              .:::...|.|......|.:.||::.|:||..:.|...|.:||
  Fly   366 IWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 76/362 (21%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 73/341 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465356
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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