DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or24a and Or1a

DIOPT Version :9

Sequence 1:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:366 Identity:70/366 - (19%)
Similarity:133/366 - (36%) Gaps:83/366 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IATALDALCPVASSILSLVKMVAIWWYQDELRSLIERVRF-LTEQQKSKRKLGYKKRFYTLATQL 132
            |....:||......:.||:||........:|..||::::. .||:.    .:|.:.|......||
  Fly    66 IVLCSEALMHGLQMVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEED----LVGTEWRSQNQRGQL 126

  Fly   133 ---TFLLLCCGFCTSTSYSVRHLIDNILRRTHGKDWIYETPFKMMFPDLLLRLPLYPITYILVHW 194
               .:.::|.|  ||.|:.:..:...:|:.....::...:.|:::.|            |.:...
  Fly   127 MAAIYFMMCAG--TSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLP------------YDVTQP 177

  Fly   195 HGYITVVCFV------------GADGFFLGFCLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEEA 247
            |.|....|.:            |.|..: |:|    .|.:.||                    ..
  Fly   178 HVYAMDCCLMVFVLSFFCCSTTGVDTLY-GWC----ALGVSLQ--------------------YR 217

  Fly   248 RIVREMEKLVDRHNEVAELTERLSGVMVEIT-----LAHFVTSSLIIGTSVVDILLFSGL---GI 304
            |:.::::::....|. :.....|||:.||..     :.||..|.:.|  :.|::::..||   .|
  Fly   218 RLGQQLKRIPSCFNP-SRSDFGLSGIFVEHARLLKIVQHFNYSFMEI--AFVEVVIICGLYCSVI 279

  Fly   305 IVYVV------------YTCAVGVEIFLYCLGGSHIMEACSNLARSTFS-SHWYGHSVRVQKMTL 356
            ..|::            ::..|..::.:|..|...:.......:|..:. ..|.....:.:|:.|
  Fly   280 CQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFL 344

  Fly   357 LMVARAQRVLTIKIPFFSPSLETLTSILRFTGSLIALAKSV 397
            ..:.||||...:...||......|..|.|..||...|..::
  Fly   345 FPIERAQRETVLGAYFFELGRPLLVWIFRTAGSFTTLMNAL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 67/355 (19%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 64/342 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465064
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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