DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CI and mep1a.2

DIOPT Version :9

Sequence 1:NP_001285599.1 Gene:Sr-CI / 33621 FlyBaseID:FBgn0014033 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001122199.1 Gene:mep1a.2 / 565535 ZFINID:ZDB-GENE-041001-208 Length:689 Species:Danio rerio


Alignment Length:428 Identity:85/428 - (19%)
Similarity:140/428 - (32%) Gaps:115/428 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LVGGRTAY--CDGERWSTQLGSCRRSNHTRDHSCDFESEDQCGWEAETTFRRPWKRVSTVSDIHS 167
            ::|.|..:  .|.||.: ::..| .:.||....|.||..:.||..........|.:..:.:|:  
Zfish   233 IIGQRLDFSALDLERLN-RMYEC-TA
THTLLDQCAFEQINICGMIQNDEDDADWVQTLSSTDL-- 293

  Fly   168 LRTGPRHDHTFKNE--SGGHYMRMETQMGAYGSYHLLSP--IYPRSLTLKTACCFRFHYFMFGAG 228
                  .|||...:  ..|::|:.:|.....|...||..  :||:    :...|..|.|.|.|..
Zfish   294 ------KDHTLGGQCRDSGYFMKFDTDNKTEGHSALLESRILYPK----RNQQCLEFFYRMSGEP 348

  Fly   229 VDNLVVSVKPVSMPMATMWNRF---RANCSKFE----ISGQQGTQWLEHTISIDEMQEDFQVIFT 286
            .|.|::            |.|.   ..|.:|..    |:|.....|....:::: ::|.|:..|.
Zfish   349 GDKLII------------WVRTDDGTGNVNKVRKVHTITGHGDNSWNIAQVTLN-VKEKFRYFFQ 400

  Fly   287 ATDARSQFGDIAIDDVKLMTGSECG---------TNGFSTTTEPTAPTGS---NEQPLVYDM-MS 338
            .....::...|.|||: ::|.:.|.         ||..:|..........   |.:...|.: :.
Zfish   401 GIVGPNKTSGIFIDDI-ILTETSCPNTVWRIQNFTNLLNTLPHDAKVQSERFYNSEGYAYGINVY 464

  Fly   339 CSGRCGTSISASNITNNGIVMGCGCNDECLSDETCCLNYLEECTKELLTTTEDDISSLPPTVTST 403
            .:||..:|.....||.|  :.| |.||..|  |...:|      :::..|.:|   ..|......
Zfish   465 PNGRVNSSKEFVGITFN--LFG-GENDAVL--EWPAVN------RQVTVTAKD---QNPDATLQM 515

  Fly   404 STSTTRKSTTTTTTSTTTTSTTTTKRPTT------------------------------------ 432
            |.|          .|.||.:.....:|:|                                    
Zfish   516 SNS----------RSFTTDADMRWNKPSTFEQWDDSCLCFRGPEFGWGTFISHDQLRRRDFLKND 570

  Fly   433 -TTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPK 469
             ...|...........::.||..|..|:|.......||
Zfish   571 DLIITINFDDLAHLVKSEVPTKVSNNPQPAEKNIEKPK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CINP_001285599.1 CCP 22..72 CDD:214478
CCP 77..125 CDD:214478 5/21 (24%)
MAM 131..308 CDD:214533 41/187 (22%)
MAM 136..308 CDD:99706 40/182 (22%)
Somatomedin_B 335..385 CDD:295334 13/50 (26%)
mep1a.2NP_001122199.1 ZnMc 26..254 CDD:294052 5/21 (24%)
Astacin 68..256 CDD:279708 6/24 (25%)
MAM 259..423 CDD:214533 41/189 (22%)
MAM 264..423 CDD:99706 40/184 (22%)
MATH 423..579 CDD:295307 30/179 (17%)
EGF 619..653 CDD:278437
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I5116
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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