DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CI and mep1a.1

DIOPT Version :9

Sequence 1:NP_001285599.1 Gene:Sr-CI / 33621 FlyBaseID:FBgn0014033 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001025452.1 Gene:mep1a.1 / 553530 ZFINID:ZDB-GENE-041001-209 Length:598 Species:Danio rerio


Alignment Length:224 Identity:52/224 - (23%)
Similarity:79/224 - (35%) Gaps:48/224 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 YVLVGGRTAYCDGERWS----TQLGSCRRSNHTRDHSCDFESEDQCGWEAETTFRRPWKRVSTVS 163
            |.::|   .|.|.....    .::.:|..|....| .|.||..:.||....:|....|..:.:  
Zfish   228 YKIIG---QYLDFSEMDIVRLNRMYNCSS
SLTLLD-QCAFEKINICGMVQSSTDDGDWVHLKS-- 286

  Fly   164 DIHSLRTGPRHDHTFKNESG--GHYMRMETQMGAYGSYHLLSP--IYPRSLTLKTACCFRFHYFM 224
                     ..|||...:..  |:.|..:|..|......|:..  :||:    :...|.:|.|.|
Zfish   287 ---------SEDHTLSGQCRDLGYTMHFDTSSGQAERSALIESRILYPK----RKLQCLQFFYKM 338

  Fly   225 FGAGVDNLVVSVKPVSMPMATMWNRFRANCSKFEISGQQGTQWLEH----TISIDEMQ--EDFQV 283
            .|:..|.||:            |.|......:.....:..|.|.:.    .|:...||  ..|:.
Zfish   339 TGSAKDRLVI------------WARMDDGTGEVRKLKKLQTIWADEDKTWKIAHVPMQVGAKFRY 391

  Fly   284 IFTAT--DARSQFGDIAIDDVKLMTGSEC 310
            .|.|.  |:.|..|.|.|||:.| |.:.|
Zfish   392 AFQAVKGDSSSSGGGIFIDDISL-TETHC 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CINP_001285599.1 CCP 22..72 CDD:214478
CCP 77..125 CDD:214478 4/25 (16%)
MAM 131..308 CDD:214533 45/188 (24%)
MAM 136..308 CDD:99706 44/183 (24%)
Somatomedin_B 335..385 CDD:295334
mep1a.1NP_001025452.1 ZnMc 26..251 CDD:294052 4/25 (16%)
Astacin 65..253 CDD:279708 5/27 (19%)
MAM 261..420 CDD:279023 45/187 (24%)
MAM 261..419 CDD:99706 44/185 (24%)
MATH 419..582 CDD:295307 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I5116
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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