DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CI and mdga2a

DIOPT Version :10

Sequence 1:NP_477102.1 Gene:Sr-CI / 33621 FlyBaseID:FBgn0014033 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_068074984.1 Gene:mdga2a / 368826 ZFINID:ZDB-GENE-030616-360 Length:964 Species:Danio rerio


Alignment Length:239 Identity:62/239 - (25%)
Similarity:99/239 - (41%) Gaps:44/239 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GERWSTQLGSCRRSNHTRDHS----------CDFESEDQCGWEAETTFRRPWKR--VSTVSDIHS 167
            ||..||: ...|.|..:||.:          |.||.:..|.:..:.|....|.|  .:|....::
Zfish   725 GEGDSTE-RIIRYSEASRDTAPVNPHWSKFHCGFEEDTICMFTQDKTEEFDWTRHSAATRDTKYT 788

  Fly   168 LRTGPRHDHTFKNESGGHYMRMETQMGAY--GSYHLLSP---IYPR----SLTLKTACCFRFHYF 223
            ..|||..|.:...:  |.||.:||.....  ....||:|   :.|:    ::......||.|:|.
Zfish   789 PNTGPSSDRSGSKQ--GFYMYIETSRPRLEGDKARLLTPSFNVAPKNPYGNVASNPTYCFSFYYH 851

  Fly   224 MFGAGVDNLVVSVKPVSMPMATMWNRFRANCSKFEISGQQGTQWLEHTISIDEMQEDFQVIFTAT 288
            |:|..:..|.|.::..|        :...:.|.:.:||.||.:|.:..::|:. ...||::....
Zfish   852 MYGKHIGTLNVYLRQKS--------QTGQDTSVWTLSGNQGDRWRQARVNINP-TSSFQIVMEGI 907

  Fly   289 DARSQFGDIAIDDVKLMTGSECGTNGFSTTTEPTAPTGSNEQPL 332
            ......||||:|||.:..| ||        .:|  |..||.:.|
Zfish   908 RGSGIEGDIAVDDVTIEEG-EC--------RDP--PPSSNIRSL 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CINP_477102.1 CCP 22..72 CDD:214478
CCP 77..125 CDD:214478 4/9 (44%)
MAM 131..308 CDD:214533 48/197 (24%)
Somatomedin_B 335..385 CDD:470596
mdga2aXP_068074984.1 IG_like 48..128 CDD:214653
Ig strand B 58..62 CDD:409353
Ig strand C 71..75 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 107..112 CDD:409353
IG_like 154..223 CDD:214653
Ig strand B 155..159 CDD:409353
Ig strand C 168..172 CDD:409353
Ig strand E 193..204 CDD:409353
Ig strand F 214..219 CDD:409353
IG_like 252..329 CDD:214653
Ig strand B 261..265 CDD:409353
Ig strand C 275..279 CDD:409353
Ig strand E 294..298 CDD:409353
Ig strand F 308..313 CDD:409353
Ig 350..421 CDD:472250
Ig strand B 356..360 CDD:409353
Ig strand C 369..375 CDD:409353
Ig strand E 401..405 CDD:409353
Ig strand F 415..420 CDD:409353
Ig strand G 429..432 CDD:409353
IG_like 452..537 CDD:214653
Ig strand B 462..466 CDD:409353
Ig strand C 475..479 CDD:409353
Ig strand E 499..503 CDD:409353
Ig strand F 513..517 CDD:409353
MAM 755..929 CDD:459878 49/193 (25%)
Blue background indicates that the domain is not in the aligned region.

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