DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sr-CI and MALRD1

DIOPT Version :9

Sequence 1:NP_001285599.1 Gene:Sr-CI / 33621 FlyBaseID:FBgn0014033 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_011517755.1 Gene:MALRD1 / 340895 HGNCID:24331 Length:2176 Species:Homo sapiens


Alignment Length:389 Identity:90/389 - (23%)
Similarity:133/389 - (34%) Gaps:139/389 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 HVENLSLRADVVCHDGYVLVGGRTAYCDGERW---STQLG------------------------- 123
            |:||        .||..|:  .|..|..|::|   :.|||                         
Human   773 HMEN--------SHDSTVI--WRVLYNQGKQWLEATIQLGRLSQPFHLSLDKVSLGIYDGVSAID 827

  Fly   124 --------------SCRR-----SNHTR--------------------------DHSCDFESEDQ 143
                          ||..     ..|||                          :..|:||: ..
Human   828 DIRFENCTL
PLPAESCEGLDHFWCRHTRACIEKLRLCDLVDDCGDRTDEVNCAPELQCNFET-GI 891

  Fly   144 CGWEAETTFRRPWKRVSTVSDIHSLRTGPRHDHTFKNESGGHYMRMETQ--MGAYGSYHLLSPIY 206
            |.||.:......|.|  :.....:|.|||..|:|. ..:.|||:.:|:.  .....|..|||||.
Human   892 CNWEQDAKDDFDWTR--SQGPTPTLNTGPMKDNTL-GTAKGHYLYIESSEPQAFQDSAALLSPIL 953

  Fly   207 PRSLTLKTACCFRFHYFMFGAGVDNLVVSVKPVSMPMATMWNRFRANCSKFEISGQQGTQWLEHT 271
              :.|....|.|||:|.|||..:..|.:..:        :|:..|... .::|.|.||.:|:...
Human   954 --NATDTKGCTFRFYYHMFGKRIYRLAIYQR--------IWSDSRGQL-LWQIFGNQGNRWIRKH 1007

  Fly   272 ISIDEMQEDFQVIFTATDARSQFGDIAIDDVKLMTGSECGT-NGFSTTTEPTAPTGSNEQPLVYD 335
            ::|...| .||::..|:......|||||||:..|   :|.. .|......||.|..|        
Human  1008 LNISSRQ-PFQILVEASVGDGFTGDIAIDDLSFM---DCTL
YPGNLPADLPTPPETS-------- 1060

  Fly   336 MMSCSGRCGTSISASNITNNGIVMGCGCNDECL---------------SDETCCLNYLEECTKE 384
                   ...::...|.|:|..:  |..:..|:               |||..|:  :|.|:.|
Human  1061 -------VPVTLPPHNCTDNEFI--CRSDGHCIEKMQKCDFKYDCPDKSDEASCV--MEVCSFE 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CINP_001285599.1 CCP 22..72 CDD:214478
CCP 77..125 CDD:214478 13/79 (16%)
MAM 131..308 CDD:214533 56/204 (27%)
MAM 136..308 CDD:99706 54/173 (31%)
Somatomedin_B 335..385 CDD:295334 12/65 (18%)
MALRD1XP_011517755.1 LDLa 58..87 CDD:238060
MAM 93..246 CDD:279023
MAM 93..246 CDD:99706
MAM 290..438 CDD:279023
MAM 290..438 CDD:99706
LDLa 454..485 CDD:197566
MAM 496..655 CDD:279023
MAM 496..652 CDD:99706
MAM 674..836 CDD:279023 13/72 (18%)
MAM 674..833 CDD:99706 13/69 (19%)
LDLa 847..879 CDD:238060 3/31 (10%)
MAM 885..1044 CDD:279023 55/177 (31%)
MAM 885..1041 CDD:99706 54/174 (31%)
LDLa 1070..1105 CDD:238060 7/36 (19%)
MAM 1110..1276 CDD:279023 2/4 (50%)
MAM 1110..1273 CDD:99706 2/4 (50%)
LDLa 1283..1315 CDD:197566
MAM 1327..1483 CDD:279023
MAM 1327..1481 CDD:99706
LDLa 1503..1537 CDD:238060
MAM 1541..1693 CDD:99706
MAM 1541..1691 CDD:279023
LDLa 1704..1739 CDD:238060
MAM 1749..1910 CDD:99706
MAM 1749..1909 CDD:279023
LDLa 1923..1958 CDD:238060
LDLa 1967..2001 CDD:238060
EGF_CA 2044..2076 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9778
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.