DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CI and Mdga2

DIOPT Version :10

Sequence 1:NP_477102.1 Gene:Sr-CI / 33621 FlyBaseID:FBgn0014033 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001180195.2 Gene:Mdga2 / 320772 MGIID:2444706 Length:956 Species:Mus musculus


Alignment Length:209 Identity:61/209 - (29%)
Similarity:88/209 - (42%) Gaps:27/209 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 HTRDHSCDFESEDQCGWEAETTFRRPWKRVSTV--SDIHSLRTGPRHDHTFKNESGGHYMRMETQ 192
            |.|:..|.||..:.|.:..:.|....|.:.||.  :..::..|||..|.:...|  |.||.:||.
Mouse   742 HLREFHCGFEDGNICLFTQDDTDNFDWTKQSTATRNTKYTPNTGPSADRSGSKE--GFYMYIETS 804

  Fly   193 MGAY--GSYHLLSPIY------PRSLTLKTACCFRFHYFMFG--AGVDNLVVSVKPVSMPMATMW 247
            ....  ....||||::      |...| .:|.||.|.|.|:|  .||.|:.:.:|..:.....:|
Mouse   805 RPRLEGEKARLLSPVFSIAPKNPYGPT-NSAYCFSFFYHMYGQHIGVLNVYLRLKGQTTIENPLW 868

  Fly   248 NRFRANCSKFEISGQQGTQWLEHTISIDEMQEDFQVIFTATDARSQFGDIAIDDVKLMTGSECGT 312
            :.          ||.:|.:|.|..::|..: ..||:||.........||||||||.:..| ||..
Mouse   869 SS----------SGNKGQRWNEAHVNIYPI-TSFQLIFEGIRGPGIEGDIAIDDVSIAEG-ECAK 921

  Fly   313 NGFSTTTEPTAPTG 326
            ....|........|
Mouse   922 QDLPTKNSVDGAVG 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CINP_477102.1 CCP 22..72 CDD:214478
CCP 77..125 CDD:214478
MAM 131..308 CDD:214533 55/188 (29%)
Somatomedin_B 335..385 CDD:470596
Mdga2NP_001180195.2 IG_like 48..128 CDD:214653
Ig strand B 58..62 CDD:409394
Ig strand C 71..75 CDD:409394
Ig strand E 93..97 CDD:409394
Ig strand F 107..112 CDD:409394
Ig_3 134..219 CDD:464046
IG_like 251..328 CDD:214653
Ig strand B 260..264 CDD:409412
Ig strand C 274..278 CDD:409412
Ig strand E 293..297 CDD:409412
Ig strand F 307..312 CDD:409412
Ig 349..424 CDD:472250
Ig strand B 355..359 CDD:409353
Ig strand C 370..374 CDD:409353
Ig strand E 400..404 CDD:409353
Ig strand F 414..419 CDD:409353
Ig strand G 428..431 CDD:409353
Ig_3 441..518 CDD:464046
MAM 748..919 CDD:99706 55/185 (30%)
Blue background indicates that the domain is not in the aligned region.

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