DRSC/TRiP Functional Genomics Resources

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Protein Alignment ed and bcam

DIOPT Version :10

Sequence 1:NP_523469.2 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:NP_001352817.1 Gene:bcam / 767689 ZFINID:ZDB-GENE-060929-620 Length:611 Species:Danio rerio


Alignment Length:500 Identity:116/500 - (23%)
Similarity:195/500 - (39%) Gaps:84/500 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 CNFFLIAL-VALSSTTL-ADESIDTRENADLTLKCRFNDKYEANDFSFFWTRWTANPAQFDNVAI 88
            |....:.| |.|:|.|: .:..:...:...:.|.|.:....||    ....:|      |...|.
Zfish    13 CTLLAVVLQVCLASVTVKVNPEMHVLKGDTVMLPCTYTTSAEA----AVAVQW------FIEFAD 67

  Fly    89 G---EVQLSSGYRLDFQPERGIYDLQIKNVSYN------RDNGRFECRIKAKGTGADVHQEFHNL 144
            |   :|...|....|.......|.:: |::|.|      .|:.:|.|::.|...|  ..:....:
Zfish    68 GGRKQVAYKSSVGSDAGTFTDRYTIE-KDMSLNISQVTVDDHKKFICQVTAGPVG--TAESATEV 129

  Fly   145 TVLTPPHPPVISPGNIAVATEDKPMELT----CSSIGGSPDPTITWYREGSNTPLPAT------- 198
            .|.:.|..|::.|....:..:.......    |.|..|.|:|.|.|:::  :.|||..       
Zfish   130 KVFSAPEKPMVVPNPQKIFVDSSISSSAEVGKCISRNGHPEPRIIWFKD--DNPLPEEKKKTEKT 192

  Fly   199 -----VLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRVE-- 256
                 ::|..:......:.|.:...:.|..:.|.|:|.....:...:.|::...|::.....|  
Zfish   193 YMIHFLVKEASGLYTLTSMLYMHLTKADAKSVYHCIVEYTMPDNQIKQESSDNFNISLQYSTENV 257

  Fly   257 ---VGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSV--QDAGKYTC 316
               |..|.|::...|  ..::|..|..|: |...:.: |..:...|..|:.:.|:  :|:|.|.|
Zfish   258 FFKVKNEGPIKEGDD--VVMQCETDGNPQ-PQFDFFK-GEKLLEGLGGTLKKKSITREDSGTYKC 318

  Fly   317 IADN-------GLGKTGEQELILDILYPPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLK 374
            .|.:       .|.||    |.:::.|..:.|.........:||.|.::|...|:.|. |::|.|
Zfish   319 EAMDYEADSKVQLHKT----LNINVHYIDITVEPEGPLVVSKGDHVELQCKAKASEAH-TLQWTK 378

  Fly   375 ENSPDFRYNGDVLTLTSVRADHAGNYICRAVNIMQS-QGMERSERVGNSTVALLVRHRPGQAYI- 437
            ::..  ..|..|....||.....|.|:|  |..:.| .|:::..   |.||.:     .||..| 
Zfish   379 DSKE--LSNTGVFAKESVTLADGGVYVC--VGAVPSVPGLQKQV---NITVNV-----KGQPEID 431

  Fly   438 TPNKPVVHVGNG-VTLTCSANPPGWPVPQYRWFRDMDGEFSSTQK 481
            .|.|.:|....| |||.|||  .|.|.||:.|  ...|:.|.|.|
Zfish   432 APVKGLVDKEGGMVTLNCSA--LGHPAPQFIW--TPSGKESVTVK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_523469.2 V-set 50..147 CDD:462230 20/105 (19%)
Ig 153..249 CDD:472250 19/111 (17%)
Ig strand B 169..173 CDD:409353 0/7 (0%)
Ig strand C 183..187 CDD:409353 1/3 (33%)
Ig strand E 211..215 CDD:409353 1/3 (33%)
Ig strand F 225..230 CDD:409353 2/4 (50%)
Ig strand G 242..245 CDD:409353 1/2 (50%)
Ig_3 253..320 CDD:464046 18/73 (25%)
Ig_3 337..406 CDD:464046 17/68 (25%)
Ig_2 437..>504 CDD:464026 19/46 (41%)
Ig 525..635 CDD:472250
Ig strand B 545..549 CDD:409568
Ig strand C 558..562 CDD:409568
Ig strand E 587..591 CDD:409568
Ig strand F 615..620 CDD:409568
Ig strand G 628..631 CDD:409568
Ig_3 639..724 CDD:464046
FN3 741..848 CDD:238020
bcamNP_001352817.1 Ig 27..131 CDD:472250 21/116 (18%)
Ig strand B 43..47 CDD:409353 1/3 (33%)
Ig strand C 59..62 CDD:409353 1/8 (13%)
Ig strand E 96..100 CDD:409353 1/3 (33%)
Ig strand F 110..115 CDD:409353 2/4 (50%)
Ig strand G 124..127 CDD:409353 0/2 (0%)
Ig 138..234 CDD:472250 18/97 (19%)
Ig strand C 172..176 CDD:409353 1/3 (33%)
Ig strand E 191..195 CDD:409353 0/3 (0%)
Ig_3 267..320 CDD:464046 13/56 (23%)
Ig_2 351..422 CDD:464026 20/78 (26%)
Ig_3 428..499 CDD:464046 19/48 (40%)
Blue background indicates that the domain is not in the aligned region.

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