DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and nphs1

DIOPT Version :10

Sequence 1:NP_523469.2 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_073779348.1 Gene:nphs1 / 692352 ZFINID:ZDB-GENE-051102-1 Length:1287 Species:Danio rerio


Alignment Length:1291 Identity:247/1291 - (19%)
Similarity:428/1291 - (33%) Gaps:426/1291 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SIDTRENADLTLKCRFNDKYEANDFSFFWTRWTANPAQFDNVAIGEVQLSSG---YRLDFQPERG 106
            ::..|..|...|||.......|       .:|..     |.:.:|.::...|   |.:....::|
Zfish    80 NVTVRAGATALLKCEVLRASGA-------VQWVK-----DGLLLGPLRSLPGYPRYSMTGDQKKG 132

  Fly   107 IYDLQIKNVSYNRDNGRFECRIKAKGTGADVHQEFHNLTVLTPPHPPVISPGNIAVATEDKPMEL 171
            .|.|||.:|:. .|:|.:||::....:...:......|.|..|...|.....:.....|.:...:
Zfish   133 QYHLQILDVTL-EDDGPYECQVGRSESSRPIVSRTVWLNVQIPSSQPYFQLESEEPWVEGEQYTV 196

  Fly   172 TCSSIGGSPDPTITWYREGSNTPLPATVLKGGTKD--QPTNATLSIIPRREDDGAKYKCVVRNRA 234
            ||.:....|...||.:|:|.......:....|::|  |.|:|.::|..|..||..:..|..:|.|
Zfish   197 TCIAPDAKPPAEITMFRDGEELLESESYTMSGSQDKLQNTHAEVTIRARSSDDTRRLTCRAKNPA 261

  Fly   235 MNEGKRLEATATLNVNYYPRVE--VGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISS 297
              ..:.||...|:.|.:.|:..  :|.||. .|:.....|:.|.......:..:.|.:||..:|:
Zfish   262 --SPRALETGMTMKVYFPPQAPMIMGLENE-EVKAGSFLKVVCMSYGGNPLATLHWTKNGEVLST 323

  Fly   298 S--------LVHTIHRVSVQDAGKYTCIADNGLGKTGEQEL----ILDILYPPMVVIESKTREAE 350
            |        ...::.::.|:....:..:....:.:.....:    .|.:|:.|..|....:.||.
Zfish   324 SWDVDFVSRRASSVLKMEVKPEDNHAVLQCQSINQVTRSPMSLTRTLTVLFEPAEVTLLGSFEAV 388

  Fly   351 EGDTVTIRCNVTANPAPVTIEW---LKE-NSPDFRY----NGDVLTLTSV-----RADHAGNYIC 402
            ||:.:.:.|:.:::..||.|.|   .|| |..:..:    ||.::|::::     |.|:..:..|
Zfish   389 EGEEINLSCSTSSSNPPVHIRWWLGFKELNRTEVTFAEGDNGGMMTVSNLTHKVSREDNGLSLQC 453

  Fly   403 RAVNIMQSQGMERSERVGNSTVA-LLVRHRPGQAYITPNKPVV--HVGNGVTLTC---SANPPGW 461
            .|.|        :..|..:...| |:|.:.|.:.::....|.|  |.|:.:.|.|   ..||.| 
Zfish   454 EAFN--------KGTRFSSVRAAELIVYYPPQKVWLDAPPPNVFLHSGSTLRLVCFSSGGNPTG- 509

  Fly   462 PVPQYRWFR-------------------------------------------------------- 470
               |..|.:                                                        
Zfish   510 ---QLTWLKNNKVVLTASKQVSSERGVSRELLLILHPSDNLATYRCDSSNKAKKVLSTQTKFRVL 571

  Fly   471 ---------------------DMD---GEFSSTQKI-------LAQGPQYSIPKAHLGNEGK--- 501
                                 |:|   |..:.|..|       :.:|...:..:|..|...:   
Zfish   572 FPAVSVKIVAKQKELRRGQTLDLDCLAGSSNPTANISWSLGPVILKGVDQAPKRAEFGGMSRTSK 636

  Fly   502 -------YH------CHAV-NELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAK 552
                   :|      |.|. |.|..|:.....|::..||:|..:....:  :|.: |.|.|..||
Zfish   637 LSLTLESHHWRKRITCQAFSNVLSEGVNNFYSLDVLFPPEFSDEQPDEV--QVIE-DETATLPAK 698

  Fly   553 GKPAP---SVKWLKDAVEILPEENL---------------------YEVQTNPDQGLNG---MVT 590
            ....|   :.:|:....:::.|.:.                     |.::.:..:|.|.   .:.
Zfish   699 VSANPDEITCEWIFQGEKLVKERDPRYTFSDWTLEIVNVSRRDGGDYIIECSNAEGSNRTKLRLD 763

  Fly   591 VQSQLKFRGKARP--------------------------------------------NGNAL--- 608
            ||.....|.|:.|                                            :|..:   
Zfish   764 VQYSPTVRMKSDPVFVNIGDTADLLCVADANPITSSMFSWKWMGEGERDELGEESEDDGTGVLTI 828

  Fly   609 --VPGDR-GLYTCLYQNEVNSANS-SMQLRIEHEPIVLH--QYNKVAF--DIRETAEVVCKVQAY 665
              |..|| |:|.|...|.::...| ..||.:...|.:..  |:.|||.  |....|.|||:.|..
Zfish   829 YEVTRDRAGVYQCTADNGISPTGSVEGQLIVRFAPDLQKGPQWRKVASRGDGSNDANVVCQAQGV 893

  Fly   666 PKPEFQWQFGNNPSPLTMSSDGHYEISTTTDNNDIYTSVLK-INSLTHSDYGEYTCRVANTLDTI 729
            |:.:|:|  ..|..||.:.:..:.|  ||.....|:||:|. ||.....||..:||...|::...
Zfish   894 PRVQFRW--AKNGFPLDLGNPRYEE--TTESTGTIHTSILTVINVSAALDYAIFTCTAHNSMGED 954

  Fly   730 RAPIRLQQKGPPEKPTNLRATEVGHNYVSLSWDPGFDGGLSKTKFF---------VSYRRVAMPR 785
            ...|:|.....|:.|::|:...|....|:|.|.|||||||  |:.|         .||..|    
Zfish   955 SLDIQLLSTNHPDPPSDLKLLRVDQTSVTLEWMPGFDGGL--TQIFRVRYQWAGSASYMYV---- 1013

  Fly   786 EEQLIPDCATLANSNSAWVEVDCQRDIPCKVTALEQHQSYAFKVKALNPKSDSPYSSEIMVTTKV 850
              .:.|..||:..                 ||.|.....|.|.|.|||...:|.|:.        
Zfish  1014 --DVFPPTATVYT-----------------VTGLNPSTMYNFSVNALNSIGESSYAD-------- 1051

  Fly   851 SRIPPPLQVTYEPNTRTLGIDVGATCLNLVAVVESMVNADSPMAAWEVVTTMDNLQLSGNGPTHK 915
                         |.:.|                             :|||.|            
Zfish  1052 -------------NNKIL-----------------------------MVTTAD------------ 1062

  Fly   916 EKIIDRIIGARRVGGGRALGHTISEDEDDNGLNSLALEDENSPTVRVKLCLRTNPEHCGDYTDAE 980
                     |:...||      :|..:.|:.|                                 
Zfish  1063 ---------AKEADGG------VSTADQDSAL--------------------------------- 1079

  Fly   981 IGRPYIAEANALATPTLIAIIVSCVVFALFAGLILMFCRCKRNQSKK---SAAAKDYEMDSVRPS 1042
                   ....|....::.::|..|:|.|...:..:..|.||.:|.|   |:.:::.:.:..|.:
Zfish  1080 -------AGGGLPVYVVVILVVGGVLFLLNPFICFLLARWKRRRSLKGDTSSISQETKSEEQRST 1137

  Fly  1043 IVAAQQNQAPPPYYPASGLDNKALEHSMDLALSMEDQKTALYAT----QNGYSYHP 1094
            ..::.:       |.:..|.|.:.:.:: |..|..:..:::|.:    :|.:.|:|
Zfish  1138 ASSSTR-------YASRELINASAQRTL-LVDSSSEPDSSVYESYGRQENPHYYYP 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_523469.2 V-set 50..147 CDD:462230 21/99 (21%)
Ig 153..249 CDD:472250 24/97 (25%)
Ig strand B 169..173 CDD:409353 0/3 (0%)
Ig strand C 183..187 CDD:409353 2/3 (67%)
Ig strand E 211..215 CDD:409353 1/3 (33%)
Ig strand F 225..230 CDD:409353 1/4 (25%)
Ig strand G 242..245 CDD:409353 1/2 (50%)
Ig_3 253..320 CDD:464046 13/76 (17%)
Ig_3 337..406 CDD:464046 21/81 (26%)
Ig_2 437..>504 CDD:464026 20/174 (11%)
Ig 525..635 CDD:472250 31/187 (17%)
Ig strand B 545..549 CDD:409568 1/3 (33%)
Ig strand C 558..562 CDD:409568 0/3 (0%)
Ig strand E 587..591 CDD:409568 0/6 (0%)
Ig strand F 615..620 CDD:409568 2/4 (50%)
Ig strand G 628..631 CDD:409568 1/3 (33%)
Ig_3 639..724 CDD:464046 30/89 (34%)
FN3 741..848 CDD:238020 33/115 (29%)
nphs1XP_073779348.1 None

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