DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and kirrel3a

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_700618.5 Gene:kirrel3a / 571887 ZFINID:ZDB-GENE-091117-44 Length:774 Species:Danio rerio


Alignment Length:768 Identity:188/768 - (24%)
Similarity:286/768 - (37%) Gaps:189/768 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 DNVAIGEVQLSSGY-RLDF--QPERGIYDLQIKNVSYNRDNGRFECR-IKAKGTGADVHQEFHNL 144
            |.:|:|..:..||| |.|.  ...:|.|.|.|:.... .|:|.|||: |:..|.....     .|
Zfish    56 DGLALGVNRDLSGYPRYDVIGDHSKGEYHLLIERTEL-VDDGSFECQAIQVAGRSRPA-----QL 114

  Fly   145 TVLTPPHPPVISPGNIAVATEDKPMELTCSSIGGSPDPTITWYREG---SNTPLPATVLKGGTKD 206
            |||.||..|||....:........:.|||.:....|..:|.|.|.|   :......|:|:.| |.
Zfish   115 TVLVPPDDPVIIGAPVVSLRAGDSLNLTCHANNAKPAASIIWIRNGEVINGAAYTKTLLRDG-KR 178

  Fly   207 QPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRVEVGPENPLRVERDRTA 271
            :.|.:||.|.....:.|.:..|...|:|...||  |||.|:::.::|.|.:..| |..|......
Zfish   179 ESTVSTLHISASNIESGQQITCRASNKAAPNGK--EATVTIDI
QHFPLVNLSVE-PQPVLEGNLV 240

  Fly   272 KLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYT----CIADNGLGKTGEQELIL 332
            |..|...|.|.|.:.||.:.|..|:.:...| :.|.| |...:|    |...|.||.|.....: 
Zfish   241 KFHCAAKANPPVTHYRWAKGGSMITDATGDT-YEVLV-DHSFFTEPVSCEVTNALGSTNISRNV- 302

  Fly   333 DILYPPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRYNGDVLTLTSVRADHA 397
            |:.:.|.:..|.::.:.:.|......|....||: :||.|:|........|.:.|||.:||.:.|
Zfish   303 DVYFGPRLAAEPQSLQVDRGSDAVFSCAWIGNPS-LTIVWMKRGHGVVLSNENTLTLKAVRQEDA 366

  Fly   398 GNYICRAVNIMQSQGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHVGNGVTLTC---SANPP 459
            |.|:||||  :...|      ||...|.|.| :.|.....|..:..:: |....:.|   |..||
Zfish   367 GKYVCRAV--VPRVG------VGEKEVMLTV-NGPPSISSTQTQQALY-GEKGQIKCFIRSTPPP 421

  Fly   460 GWPVPQYRWFRDMDGEFSSTQKILAQGP--QYSIPKAHLGNEGK-----------------YHCH 505
                .:..|        |..:.:|..|.  :|::..... .||.                 |:|.
Zfish   422 ----DRIAW--------SWKETVLESGTSGRYTVETVST-EEGVISTLTMRNIVPTDFQTIYNCT 473

  Fly   506 AVNELG-------------------IGM-----MATIVL---------------EIH----QPPQ 527
            |.|..|                   ||:     :|.|||               ::|    ..|.
Zfish   474 AWNSFGSDTEIIRLKEQGSLRLAVIIGVAVGAFLALIVLIGTLGAFCCARLQRKDMHLVMSSLPV 538

  Fly   528 FLAKLQQHMTRRVADTDYTVTCSAKG-----------------KPAPSVKWL--------KDAV- 566
            .|:..|:.::..|...:.....|||.                 :...:||.:        :::| 
Zfish   539 SLSSRQREISGTVKSENLKGVVSAKNDIRVEIVHKDHNAAREPEEHSNVKQMMMERADFQQESVL 603

  Fly   567 ---EILPEE-----------------NLYEVQTNPDQGLNGMVTVQSQLKFR-------GKAR-P 603
               |:|.||                 |.::.|..|...|    |.....:.|       ||.| |
Zfish   604 KQLEVLQEEERELQHIKDPTNGYYSVNTFKEQPTPTISL----TANQNAEVRNPATATLGKHRVP 664

  Fly   604 NG-------NALVPGDRGLYTCLYQNEVNSANSSMQLRIEHEPIVLHQYNKVAFDIRETAEVVC- 660
            .|       |.|..|...||....:..:...:||::| .|.|    .|...:: |.....:..| 
Zfish   665 TGMSYTNIYNTLGAGPNRLYDYSQRFVLGMGSSSIEL-CERE----FQRGSLS-DSSSFQDTQCD 723

  Fly   661 -KVQAYPKPEFQWQFGNNPSPLTMSSDGHYEISTTTDNNDIYTSVLKINSLTH 712
             .|.:|.|.:...|| :..|..::||..||. .:::.|:|: |..|:....||
Zfish   724 SSVSSYSKQDGYVQF-DKASKASVSSSSHYS-QSSSQNSDL-TRPLQKRMQTH 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 21/66 (32%)
I-set 146..249 CDD:254352 33/105 (31%)
Ig 168..249 CDD:299845 26/83 (31%)
IGc2 268..323 CDD:197706 16/58 (28%)
Ig_3 341..406 CDD:290638 21/64 (33%)
Ig_2 437..514 CDD:290606 19/117 (16%)
I-set 526..633 CDD:254352 32/167 (19%)
Ig 546..632 CDD:143165 28/146 (19%)
IG_like 654..736 CDD:214653 17/61 (28%)
Ig 656..734 CDD:143165 17/59 (29%)
FN3 741..848 CDD:238020
kirrel3aXP_700618.5 Ig 25..116 CDD:299845 20/65 (31%)
IG_like 27..116 CDD:214653 20/65 (31%)
I-set 123..217 CDD:254352 28/96 (29%)
Ig2_KIRREL3-like 139..219 CDD:143236 26/82 (32%)
Ig_2 227..304 CDD:290606 22/80 (28%)
I-set 308..389 CDD:254352 28/89 (31%)
IGc2 322..373 CDD:197706 18/51 (35%)
Ig5_KIRREL3 391..488 CDD:143306 19/110 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582416
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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