DRSC/TRiP Functional Genomics Resources

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Protein Alignment ed and kirrel1a

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:NP_001349348.1 Gene:kirrel1a / 405804 ZFINID:ZDB-GENE-040426-2126 Length:819 Species:Danio rerio


Alignment Length:676 Identity:159/676 - (23%)
Similarity:244/676 - (36%) Gaps:176/676 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 WTRWTANPAQFDNVAIG---EVQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRIKAKGTG 134
            ||:        |.:|:|   :::....||:....:.|.|:|:|.....: |:..:||    :.|.
Zfish    52 WTK--------DGLALGIGEDLRAWPRYRVLRLVDVGQYNLEISAAELS-DDSLYEC----QATE 103

  Fly   135 ADVHQEFHNLTVLTPPHPPVISPGNIAVATEDKPMELTCSSIGGSPDPTITWYREGSNTPLP--- 196
            |.:......||||.||..|||......:.|...|..::|.|.|..|...|.|.::|    ||   
Zfish   104 AALRSRRAKLTVLIPPDEPVIEGSPEILLTAGVPYNMSCVSRGAKPASVIEWQKDG----LPIEG 164

  Fly   197 ---ATVLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRV--E 256
               .|.:....|...|.:.|.|.|...|.|..:.||..|.|:..|||  ||.||||::.|.|  .
Zfish   165 AVSTTEVLPDRKRVTTRSYLPIQPLDTDTGKNFTCVATNLAVPMGKR--ATITLNVHHPPVVTLS 227

  Fly   257 VGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYT----CI 317
            :.|.:.|..||   ....|...|.|.:...:|.:.|..|..:.....  |:..|...:|    |.
Zfish   228 IEPRSVLEGER---VTFTCQATANPPIMGYKWAKGGVVIQGARESVF--VTKADHSFFTEPVSCQ 287

  Fly   318 ADNGLGKTGEQELILDILYPPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRY 382
            ..|.:|.| ...:::|:.:.|::|:|.|....:....||:.|....|| |:|:.|.|:.|.....
Zfish   288 VFNAVGST-NVSILVDVHFGPILVVEPKPVTVDVDSDVTLNCKWAGNP-PLTLTWTKKGSSMVLS 350

  Fly   383 NGDVLTLTSVRADHAGNYICRAVNIMQSQGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHVG 447
            |.:.|.|.||....||.|:|:|  |:...|      ||.:.|.|.|...|    |..::|..:..
Zfish   351 NNNQLYLKSVSQADAGQYVCKA--IVPRIG------VGETEVTLTVNGPP----IISSEPFQYAV 403

  Fly   448 NG----VTLTCSANPPG----WPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHLGN------ 498
            .|    |....::.||.    |...:..|.:: .|..|....:     :.|.|.|..|.      
Zfish   404 RGERGEVKCYIASTPPPDKIVWAWKENVWEKE-KGTLSERYTV-----EQSKPSAQGGAVLSTLT 462

  Fly   499 ---------EGKYHCHAVNELGIGMMATIVLEIHQPP-----------------------QFLAK 531
                     :..|:|.|.|..|.|.|...:.|:...|                       .||.:
Zfish   463 INNIMESDFQSTYNCTAWNSFGSGTMIISLEEMEIVPVGIIAGGTVGCSILLLLCLLALVLFLYR 527

  Fly   532 LQQHMTRRVA--------------------DTDYTVTCSAKGKP----------APSVKWLKDAV 566
            .::...|.|.                    |:....|.:...|.          :||.:..||.:
Zfish   528 QRKGSRRGVTLGKPDIKVETINKESHSLEEDSGSVSTATRMVKAMYSFLPSVTLSPSSQPFKDDI 592

  Fly   567 EILPEENLYEVQTNPDQGL----NGMVTVQSQL--------------KFRGKARPNG-------- 605
            ::..|.....:.|..|..|    ||...|::..              .:|..::|.|        
Zfish   593 DLKQELRSDTLDTRQDYELKDPTNGYYNVRASTHDEGRPASRSMHYSDYRTSSQPGGAAAVVSSS 657

  Fly   606 --------------NALVPGDR-GLY 616
                          ::|.||.| |.|
Zfish   658 SGPPPGATAGPGTPSSLAPGSRAGCY 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 18/76 (24%)
I-set 146..249 CDD:254352 37/108 (34%)
Ig 168..249 CDD:299845 29/86 (34%)
IGc2 268..323 CDD:197706 11/58 (19%)
Ig_3 341..406 CDD:290638 23/64 (36%)
Ig_2 437..514 CDD:290606 19/99 (19%)
I-set 526..633 CDD:254352 28/185 (15%)
Ig 546..632 CDD:143165 22/122 (18%)
IG_like 654..736 CDD:214653
Ig 656..734 CDD:143165
FN3 741..848 CDD:238020
kirrel1aNP_001349348.1 I-set 21..115 CDD:333254 17/75 (23%)
Ig2_KIRREL3-like 137..218 CDD:143236 29/86 (34%)
I-set 222..303 CDD:333254 19/86 (22%)
Ig_3 307..372 CDD:316449 23/65 (35%)
Ig5_KIRREL3 390..493 CDD:143306 22/112 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582424
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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