DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and side-VIII

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:NP_001097382.2 Gene:side-VIII / 37310 FlyBaseID:FBgn0086604 Length:1201 Species:Drosophila melanogaster


Alignment Length:1405 Identity:281/1405 - (20%)
Similarity:431/1405 - (30%) Gaps:558/1405 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SARRAATTICNFFLIAL---------VALSSTTLADESIDTRENADL------------------ 54
            |:|.....:|...|.||         |.:||:|....:|: .|||.|                  
  Fly     5 SSRSLFLPLCLLVLSALNGPAAAASRVRVSSSTTMTRNIE-EENALLLLLAGPPVLSESIMGTVG 68

  Fly    55 TLKCRFNDK-YEANDFSFFW------TRWTANPAQFDNVAIGEVQLSSGY--RLDFQPERGIYDL 110
            .|.|..... ||.......|      |...:...:..|.|.|.......|  ||.|..|.....|
  Fly    69 RLPCNVTPPIYEDRVALVIWYKVGLKTPIYSVDTRDSNFAQGTHWSDETYRERLSFHVEGRAGTL 133

  Fly   111 QIKNVSYNRDNGRFECRI---KAKGTGADVHQEFHNLTVLTPPHPPVI--SPGNIAVATEDKPM- 169
            .||:.:.: |.|.:.||:   |:....:.|     ||||:.||...:|  |.|   |..||..: 
  Fly   134 TIKSTTED-DTGEYRCRVDFQKSPTRNSKV-----NLTVIIPPESVIILDSKG---VTIEDHTLG 189

  Fly   170 --------ELTCSSIGGSPDPTITWYREGSNTPLPATVLKGGTKDQPTNATLSIIPRREDDGAKY 226
                    .:||.:|||.|.|.:||....       ||.|..:..||.:.               
  Fly   190 PYNEGSGINITCVAIGGRPQPRVTWLHGN-------TVYKNASVGQPLSE--------------- 232

  Fly   227 KCVVRNRAMNEGKRLEATATLNVNYYPRVEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRN 291
                        :|:..|.:|                       |:||              .||
  Fly   233 ------------RRVGNTLSL-----------------------ARLE--------------RRN 248

  Fly   292 GRFISSSLVHTIHRVSVQDAGKYTCIAD-NGLGKTGEQELILDILYPPMVV-IESKTREAEEGDT 354
                       :|.       :.||.|: |.|.......::||:...|::| ::.:.|....|::
  Fly   249 -----------LHM-------QLTCRAENNNLTTPIISSVVLDMNLRPLIVKLQGENRALSAGNS 295

  Fly   355 VTIRCNVT-ANPAPVTIEWLKEN----------SPDFRYNGDVLTLTSVRADHAGNYI-CRA-VN 406
            ..:.|.|. |.||| ||.|.|.:          :||......|||.|.. .|..|.:: ||| .:
  Fly   296 YQLSCVVIGARPAP-TITWWKGSTPMKNTHEIATPDGNLTTSVLTFTPT-IDDRGKFLSCRAEQS 358

  Fly   407 IMQSQGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHVGNGVTLTCSANPPGWPVPQYRWFRD 471
            ::...|||                                            .||.:       |
  Fly   359 MIPESGME--------------------------------------------DGWKL-------D 372

  Fly   472 MDGEFSSTQKILAQGPQYSIPKAHLGNEGKYHCHAVNELGIGMMATIVLEIHQPPQFLAKLQQHM 536
            :                |.||...|            |||...:.:.:.|               
  Fly   373 I----------------YHIPVVSL------------ELGTNSLNSTLRE--------------- 394

  Fly   537 TRRVADTDYTVTCSAKGKPAPSVKWLKDAVEILPEENLYEVQTNPDQGL---NGMVTVQSQLKFR 598
                 ..|....|:.|..|     |:   .|:....|...:..||.:|:   |..:.:|:..:.|
  Fly   395 -----GIDVFFECNIKSNP-----WI---YEVSWRHNGKILTNNPAEGIAVSNQSLVLQNASRAR 446

  Fly   599 GKARPNGNALVPGDRGLYTCLYQN-EVNSANSSMQLRIEHEPIVLHQYNKVAFDI--RETAEVVC 660
            .              |:|||:..| |.:..::.:||.|...| |.....::::..  .||.:|.|
  Fly   447 S--------------GIYTCVGSNREGDGESNPVQLDIRFAP-VCRPRQRLSYSSGRHETVKVAC 496

  Fly   661 KVQAYP-KPEFQWQFGNNPSPLTMSSDGH-YEISTTTDNNDIYTSVLKINSLTHSDYGEYTCRVA 723
            ::.|.| :..:.|:|.        ::.|. .:|..:....|...|:.....:|.:|||...|...
  Fly   497 EIDANPAEATYVWKFN--------ATQGETVDIPASQVAVDRGRSIAHYTPMTENDYGTLLCWAT 553

  Fly   724 NTLDTIRAP--IRLQQKGPPEKPTN---LRATEVGHNYVSLSWDPGFDGGLSKTKFFVSYRRVAM 783
            |.:.....|  ..:...|.|:...|   |..|..|.....:.   ||:|||.:......|     
  Fly   554 NEIGDQSEPCVYTIFPAGEPDPLLNCTVLNQTSTGFQIECIE---GFNGGLQQDFIMEVY----- 610

  Fly   784 PREEQLIPDCATLANSNSAWVEVDCQRDIPCKVTALEQHQSYAFKVKALNPKSDSPYSSEIMVTT 848
                         .|..:...::...:....:|:.|.....|...:.|.|.|..|..:...:.|.
  Fly   611 -------------MNGTTRHPKISKSKRPYFEVSGLVPGMGYNVFLIANNSKGRSNATILQVYTL 662

  Fly   849 KVSRIPPPLQVTYEPNTRTLGIDVGATCLNL-VAVVESMVNADSPMAAWEVVTTMDNLQLSGNGP 912
            |            :|..:|:.|....:...| .|..::...|.:..   :.|...|.....|.|.
  Fly   663 K------------DPEKQTVKITFTKSFQGLRPAYTKTKATATTTS---DCVCDEDEFLNLGKGI 712

  Fly   913 THKEKIIDRIIGARRVGGGRALGHTISEDEDDNGLNSLALEDENSPTVRVKLCLRTNPEHCGDYT 977
            :|.|                  |....:.||    .|||.    :|.:                 
  Fly   713 SHDE------------------GTDADQQED----LSLAY----APVI----------------- 734

  Fly   978 DAEIGRPYIA-EANALATPTLIAIIVSCVVFALFAGLILMFCRCKRNQSKKSAAAKDYEMDSVRP 1041
              |..||::. .|..:.:..|:|:|:..||                               .||.
  Fly   735 --EDIRPFLGILAGIVGSIFLVALIIVIVV-------------------------------RVRG 766

  Fly  1042 SIVAAQQNQAPPPYYPASGLDNKALEHSMDLALSMEDQKTALYATQNGYSYHPGSGVVGVGMGGG 1106
            |                ||.|                        :|.|| ||||||.|||..||
  Fly   767 S----------------SGRD------------------------RNNYS-HPGSGVGGVGGVGG 790

  Fly  1107 VVGVGVGGSVVSGMGGGVGGIGGSGVGVNGIPGLSAHTMPGNEWVNMGYMENNYSNSNNGGSV-- 1169
            ..|.|      ||||||.||:||:....||..||.|                    |||.||:  
  Fly   791 TTGNG------SGMGGGGGGVGGTTANGNGSLGLLA--------------------SNNNGSLVI 829

  Fly  1170 -----NSQDSLWQVKMSAAAVGNQQGMVQAPMNQYVEQQPAYGYDPLTHGGYGAVDDYAPYPH-- 1227
                 |...|:..:.    .:|.:...|.:.::. :::.|    |.:...|:...|::....|  
  Fly   830 GTLGHNGGQSVQDMH----RIGRETCHVTSSLDS-IDKNP----DIIPQDGHDLDDEWTTKGHGR 885

  Fly  1228 --LTATPSQVGDEYHNLRNSQN----PSRQDYCSDPYASVQKPKKRVDQHLDSPYHDVSGLPNPY 1286
              .||..::           ||    ....|:....||.|.|                ...|.|.
  Fly   886 TYATAAMAE-----------QNAVITSGTYDHLMPTYAVVDK----------------KTAPPPG 923

  Fly  1287 NMEHLEQDEVLP-----------------PQQHMSLSYDD 1309
            :.::::.:.::|                 |||...|||.:
  Fly   924 HGQYIQYNTLIPVSKMGAYANQQQQLQQQPQQKTELSYSE 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 30/126 (24%)
I-set 146..249 CDD:254352 26/113 (23%)
Ig 168..249 CDD:299845 17/89 (19%)
IGc2 268..323 CDD:197706 10/55 (18%)
Ig_3 341..406 CDD:290638 24/78 (31%)
Ig_2 437..514 CDD:290606 10/76 (13%)
I-set 526..633 CDD:254352 19/110 (17%)
Ig 546..632 CDD:143165 18/89 (20%)
IG_like 654..736 CDD:214653 19/85 (22%)
Ig 656..734 CDD:143165 17/81 (21%)
FN3 741..848 CDD:238020 19/109 (17%)
side-VIIINP_001097382.2 Ig 55..166 CDD:299845 25/116 (22%)
IG_like 60..166 CDD:214653 25/111 (23%)
Ig 182..266 CDD:299845 30/172 (17%)
Ig 296..373 CDD:299845 26/129 (20%)
IG_like 389..464 CDD:214653 20/116 (17%)
IGc2 394..459 CDD:197706 19/106 (18%)
Ig_3 490..554 CDD:290638 17/71 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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