DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and side-II

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:NP_001014485.3 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1064 Species:Drosophila melanogaster


Alignment Length:1289 Identity:250/1289 - (19%)
Similarity:416/1289 - (32%) Gaps:435/1289 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ESIDTRENADLTLKCRFNDKYEANDFSFFWTR-----------------------WTANPAQFDN 85
            :.||..|...::|.|...:..: |.:...|.|                       |:| |..|.:
  Fly    55 KDIDAVEGKSVSLPCPITEPLD-NVYMVLWFRDNAGIPLYSFDVRDKESREQPRHWSA-PEVFGS 117

  Fly    86 VAIGEVQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRIKAKGTGADVHQEFH-NLTVLTP 149
            .|        .:..|.||.    .|:||    ..|.|.:.||:..:.:..   |.|. ||:|:..
  Fly   118 RA--------KFHFDSQPA----TLEIK----RHDQGIYRCRVDFRTSQT---QSFRFNLSVIIL 163

  Fly   150 PHPPVISP--GNIAVATEDKPME------LTCSSIGGSPDPTITWYREGSNTPLPATVLKGGTKD 206
            |..|:|..  |.....|:..|.:      :||..:||.|.|.:.|...|.   |.....:..:.|
  Fly   164 PEQPIIMDRWGRQLNGTQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNGL---LVDNQNEHNSGD 225

  Fly   207 QPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRVEVGPENPLRVERDRTA 271
            ...|..|....:|.|..:.:.|...|..:::.|  |.:..|:::..|.|....|.|..:..||..
  Fly   226 VIENRLLWPSVQRNDLNSVFTCQALNTQLDKPK--EKSFILDMHLKPLVVKILEPPSSMIADRRY 288

  Fly   272 KLECNVDAKPKVPN--VRW--------------NRNGRFISSSLVHTIHRVSVQDAGK-YTCIAD 319
            ::.|  ::....||  :.|              ::|......|.|.|     ..|.|| .||.|:
  Fly   289 EVSC--ESSGSRPNAIITWYKGKRQLRRTKDDISKNSTRSELSFVPT-----TDDDGKSITCRAE 346

  Fly   320 ----NGLGKTGEQELILDILYPPMVVIESKTR----EAEEGDTVTIRCNVTANPAPVTIEWLKEN 376
                |||..  |....|:::|||:|.:...:.    :.:|||.|...|:|.:||....:.||   
  Fly   347 NPNVNGLYL--ETMWKLNVVYPPLVTLRLGSTLTPDDIKEGDDVYFECHVQSNPQWRKLLWL--- 406

  Fly   377 SPDFRYNGDVLTLTSVRADHAGNYICRAVNIMQSQGMERSERVGNSTVALLVRHRPGQAYITPNK 441
                 :||       :..:|                         :|.|.::|            
  Fly   407 -----HNG-------IHLEH-------------------------NTSARVIR------------ 422

  Fly   442 PVVHVGNGVTLTCSANPPGWPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHLGNEGKYHCHA 506
                                                |.|.::.|    .|.|.:.||   |.|.|
  Fly   423 ------------------------------------SNQSLVLQ----KITKHYAGN---YACSA 444

  Fly   507 VNELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKPAPSVKWLKDAVEILPE 571
            :|:.|                                                            
  Fly   445 INDEG------------------------------------------------------------ 449

  Fly   572 ENLYEVQTNPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDRGLYTCLYQNEVNSANSSMQLRIE 636
                             .||.:||..|.|..|             .|.:.:.|....:|..    
  Fly   450 -----------------ETVSNQLPLRVKYTP-------------MCKHADRVILIGASKD---- 480

  Fly   637 HEPIVLHQYNKVAFDIRETAEVVCKVQAYPKPE-FQWQFGNNPSPLTMSSDGHYEISTTTDNNDI 700
                             ||.||||::||.|.|. |:|:|.|:...|.:.|: .:.::.:      
  Fly   481 -----------------ETVEVVCEIQADPPPRTFRWKFNNSGETLDVGSE-RFSVNGS------ 521

  Fly   701 YTSVLKINSLTHSDYGEYTCRVANTLDTIRAPIRLQ--QKGPPEKPTN---LRATEVGHNYVSLS 760
             .|:||...:|..|||..:|..:|.:.|.:.|...|  ....|...:|   ...||:.   |.:.
  Fly   522 -RSILKYTPVTDQDYGTLSCWASNEVGTQQHPCLFQVVLAALPNAVSNCTVFNRTELS---VDIQ 582

  Fly   761 WDPGFDGGLSK-------------TKFFVSYRRVAMPREEQLIPDCATLANSNSAWVEVDCQRDI 812
            ..||:||||.:             |:|.:|....|:...|.|    .||.:              
  Fly   583 CIPGYDGGLPQIFVLEMFSTRTGITRFNLSNAEEALFSLENL----DTLTS-------------- 629

  Fly   813 PCKVTALEQHQSYAFKVKALNPKSDSP--YSSEIMVTTKVSRIPPPLQVTYEPNTRTLGIDVGAT 875
                ..::::.|...::.:.|.|..|.  ..::.::.:...:....:.:|..|      :.||:.
  Fly   630 ----MMVQENNSLRLRIYSYNQKGRSAAYLLTDFIIGSTAYKTDDDVTLTLSP------VIVGSV 684

  Fly   876 CLNLVAVVESMVNADSPMAAWEVVTTMDNLQLSGNGPTHKEKIIDRIIGARR---VGGGR----A 933
            ...::..|...:..       .|||.:.||:.:.:   |..|.....:.|:.   ..||.    .
  Fly   685 LTIIIIGVAIAIRI-------FVVTFVHNLRRNRH---HGSKATAAGVTAQPSDVFKGGNLEKPR 739

  Fly   934 LGHTISEDEDDNGLNSLALEDENSPTVRVKLCLRTNPEHCGDYTDAEIGRPYIAEANALATPTLI 998
            ..||..:.:....|    :|||..|.|.....:..:.........:.:|......|...:|.|.:
  Fly   740 WQHTDIKTKSSEDL----VEDERDPDVIPSQYVGGSSAGSSGSNASNVGSTTAGTATGSSTSTAV 800

  Fly   999 AIIVSCVVFALFAGLILMFCRCKRNQSKKSAAAKD-YEMDSVRPSIVAAQQNQAPPPYYPASGLD 1062
            ....:....|: ||         ...:..||:|.| ::..|...:........:|......:.|.
  Fly   801 VANANAAASAM-AG---------PGGATSSASATDGHQFASGTAAAGGGASKWSPNGNVTTTMLT 855

  Fly  1063 NKALEHSM---DLALSMEDQKTALYATQNGYS---YHPGSGVVG-----VGMGGGV-VGVGVGGS 1115
            ..|:..::   .:.........|:.|...|.|   ..|.|.::|     :|||.|: :|:||||:
  Fly   856 GDAVNATVTYNQINAQRAQLLAAVAAVGGGCSSTVISPSSSILGGLGKPLGMGMGMGLGMGVGGT 920

  Fly  1116 VVSGMGGGVGGIGGSGVGVNGIPGLSAH----------TMPGNEWVNMGYMENNYSNSN----NG 1166
            |:           ||...::....|:||          |:|.......||:.|.|::..    .|
  Fly   921 VI-----------GSPTSLSSTATLAAHLQPAHSSGVGTLPPGLGSGGGYILNAYASGRLHHPPG 974

  Fly  1167 GSVNSQDSLWQVKMSAAAVGNQQGMVQAPMNQYV-EQQPAYGYDPLTHGGYGAV 1219
            |.|..       ..:..|..|:....|..::.:. .|||.:....|..|..|:|
  Fly   975 GGVPG-------GATHTATLNRHHHQQQQLHHHPHHQQPHHSGSSLLMGSAGSV 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 25/120 (21%)
I-set 146..249 CDD:254352 26/110 (24%)
Ig 168..249 CDD:299845 20/86 (23%)
IGc2 268..323 CDD:197706 18/75 (24%)
Ig_3 341..406 CDD:290638 13/68 (19%)
Ig_2 437..514 CDD:290606 12/76 (16%)
I-set 526..633 CDD:254352 10/106 (9%)
Ig 546..632 CDD:143165 10/85 (12%)
IG_like 654..736 CDD:214653 27/82 (33%)
Ig 656..734 CDD:143165 25/78 (32%)
FN3 741..848 CDD:238020 23/124 (19%)
side-IINP_001014485.3 IG_like 55..160 CDD:214653 27/125 (22%)
Ig 57..160 CDD:299845 27/123 (22%)
Ig 188..251 CDD:299845 15/65 (23%)
Ig 289..363 CDD:299845 19/82 (23%)
IG_like 289..351 CDD:214653 14/68 (21%)
Ig_2 376..460 CDD:290606 32/255 (13%)
IG_like 383..454 CDD:214653 30/242 (12%)
Ig 470..548 CDD:299845 27/106 (25%)
IG_like 481..557 CDD:214653 27/83 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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