DRSC/TRiP Functional Genomics Resources

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Protein Alignment ed and f11r.1

DIOPT Version :10

Sequence 1:NP_523469.2 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_073805929.1 Gene:f11r.1 / 323696 ZFINID:ZDB-GENE-030131-2416 Length:308 Species:Danio rerio


Alignment Length:318 Identity:69/318 - (21%)
Similarity:107/318 - (33%) Gaps:117/318 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IDTRENADLTLKCRFNDKYEAN---DFSFFWTRWTANPAQFDNVAIGEVQLSSGYRLDFQPERGI 107
            :..:||..:.|:|.:...:.|.   ::.|...:.:.....||....|:          :.....:
Zfish    27 VKVKENEGVDLQCSYTSDFGATPRVEWKFKDLKGSQTLVYFDGKPTGQ----------YTGRVTM 81

  Fly   108 YDLQIKNVSYNR----DNGRFECRIKAKGTGADVHQEFHNLTVLTPPHPPVIS-PGNIAVATEDK 167
            ||   |.:.:|:    |.|.::|.:...|   ...:....||||.||..||.. |.::   |...
Zfish    82 YD---KGLRFNKVTRADTGDYDCEVSGSG---GYGENTIKLTVLVPPAKPVSRIPSSV---TTSS 137

  Fly   168 PMELTCSSIGGSPDPTITWYREGSNTPLPATVLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRN 232
            .:.|||....|||..|..||::  |||||                        :|..|:      
Zfish   138 NVRLTCFDPVGSPPSTYKWYKD--NTPLP------------------------EDPTKF------ 170

  Fly   233 RAMNEGKRLEATATLNVNYYPRVEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISS 297
                       .|..|:.|                      :.||          :|.|..|.| 
Zfish   171 -----------PAFKNLTY----------------------KMNV----------FNGNLEFPS- 191

  Fly   298 SLVHTIHRVSVQDAGKYTCIADNGLG--KTGEQELILDILYPPMVVIESKTREAEEGD 353
                    ||..|.|.|.|.|.||.|  :.|: |:.:::|   |.......|.:.:||
Zfish   192 --------VSKMDTGSYFCEASNGEGVPQRGD-EVKMEVL---MSSCRGPCRSSIQGD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_523469.2 V-set 50..147 CDD:462230 19/103 (18%)
Ig 153..249 CDD:472250 21/96 (22%)
Ig strand B 169..173 CDD:409353 1/3 (33%)
Ig strand C 183..187 CDD:409353 1/3 (33%)
Ig strand E 211..215 CDD:409353 0/3 (0%)
Ig strand F 225..230 CDD:409353 1/4 (25%)
Ig strand G 242..245 CDD:409353 0/2 (0%)
Ig_3 253..320 CDD:464046 13/66 (20%)
Ig_3 337..406 CDD:464046 4/17 (24%)
Ig_2 437..>504 CDD:464026
Ig 525..635 CDD:472250
Ig strand B 545..549 CDD:409568
Ig strand C 558..562 CDD:409568
Ig strand E 587..591 CDD:409568
Ig strand F 615..620 CDD:409568
Ig strand G 628..631 CDD:409568
Ig_3 639..724 CDD:464046
FN3 741..848 CDD:238020
f11r.1XP_073805929.1 None
Blue background indicates that the domain is not in the aligned region.

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