DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and Kirrel1

DIOPT Version :10

Sequence 1:NP_523469.2 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_011238330.1 Gene:Kirrel1 / 170643 MGIID:1891396 Length:805 Species:Mus musculus


Alignment Length:814 Identity:178/814 - (21%)
Similarity:289/814 - (35%) Gaps:226/814 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 WTRWTANPAQFDNVAIGEVQLSSG------YRLDFQPERGIYDLQIKNVSYNRDNGRFECRIKAK 131
            ||:        |.:|:|   :..|      ||:....:.|.|:|:|.:...: |:..:||    :
Mouse    85 WTK--------DGLALG---MGQGLKAWPRYRVVGSADAGQYNLEITDAELS-DDASYEC----Q 133

  Fly   132 GTGADVHQEFHNLTVLTPPHPPVISPGNIAVATEDKPMELTCSSIGGSPDPTITWYREGSNTPLP 196
            .|.|.:......||||.||....|..|.:.:.....|..|||.:....|..||.|:|:|:.....
Mouse   134 ATEAALRSRRAKLTV
LIPPEETRIDGGPVILLQAGTPYNLTCRAFNAKPAATIIWFRDGTQQEGA 198

  Fly   197 AT---VLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRVEVG 258
            .|   :||.| |.:.|.:.|.|.|...|.|..:.|...|.|:..||  |.:..|:|::.|.|.:.
Mouse   199 VTSTELLKDG-KRETTISQLLIEPTDLDIGRVFTCRSMNEAIPNGK--ETSIELDV
HHPPTVTLS 260

  Fly   259 PENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYT----CIAD 319
            .|....:|.:|.. ..|...|.|::...||.:.|..|..:  |.....:..|...:|    |...
Mouse   261 IEPQTVLEGERVI-FTCQATANPEILGYRWAKGGFLIEDA--HESRYETNVDYSFFTEPVSCEVY 322

  Fly   320 NGLGKTGEQELILDILYPPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENS------- 377
            |.:|.|....|: ::.:.|.:|:..|....:.|..||:.|....|| |:|:.|.|::|       
Mouse   323 NKVGSTNVSTLV-NVHFAPRIVVYPKPTTTDIGSDVTLTCVWVGNP-PLTLTWTKKDSNMGPRLP 385

  Fly   378 ---PDFRYNGDVLT------LTSVRADHAGNYICRAVNIMQSQGMERSERVGNSTVALLVRHRPG 433
               |:...:..||:      |.||....||.|.|||:          ..|:|       |..|..
Mouse   386 GSPPEANLSAQVLSNSNQLLLKSVTQADAGTYTCRAI----------VPRIG-------VAEREV 433

  Fly   434 QAYITPNKPVVHV--------GNGVTLTC---SANPP---GWPVPQYRWFRDMDGEFSSTQKILA 484
            ..|:. ..|::..        |:|..:.|   |..||   .|     .|          .:..|.
Mouse   434 PLYVN-GPPIISSEAVQFAVRGDGGKVECFIGSTPPPDRIAW-----AW----------KENFLE 482

  Fly   485 QG--PQYSIPKAHLGN----------------EGKYHCHAVNELGIGMMATIVLEIHQ----PPQ 527
            .|  .:|::.:.:.|:                :..|:|.|.|..|.|   |.::::.:    |..
Mouse   483 VGTLERYTVERTNSGSGVLSTLTINNVMEADFQTHYNCTAWNSFGPG---TAIIQLEEREVLPVG 544

  Fly   528 FLA-----------------------------------KL--------QQHMTRRVADTDYTVTC 549
            .:|                                   ||        ::.:|......|.|.:.
Mouse   545 IIAGATIGAGILVVFSFAALVFFLYRRRKGSRKDVTLRKLDIKVETVNREPLTMHSDREDDTASI 609

  Fly   550 SAKGKPAPSV-KWLKDAVEILPEENLYEVQTNPDQGL----NGMVTVQSQLKFRGKARPNGNALV 609
            |...:...:: ...||.|::..:.....:.|..:..:    ||...|::.     :.||:..|::
Mouse   610 STATRVMKAIYSSFKDDVDLKQDLRCDTIDTREEYEMKDPTNGYYNVRAH-----EDRPSSRAVL 669

  Fly   610 PGDRGLYTCLYQNEVNSANSSMQLRIEHEP--IVLHQYNKVAFDIRETAEVVCKVQAYPKPEFQW 672
            ..|   |........:...||   |:.|..  ..|:.|::.                 |..:   
Mouse   670 YAD---YRAPGPTRFDGRPSS---RLSHSSGYAQLNTYSRA-----------------PASD--- 708

  Fly   673 QFGNNPSPLTMSSDGHYEISTTTDNNDIYTSVLKINSLTH-----SDYGEYTCRVANTLDTIRAP 732
             :|..|:|...|:.|    .|.|.:...|.:..|.||  |     :.|..|      .|...:||
Mouse   709 -YGTEPTPSGPSAPG----GTDTTSQLSYENYEKFNS--HPFPGAAGYPTY------RLGYPQAP 760

  Fly   733 IRLQQKGPPE--KPTNLRATEVGHNYVSLSWDPG 764
            ....::.|.|  .|....||....:|.|...|.|
Mouse   761 PSGLERTPYEAYDPIGKYATATRFSYTSQHSDYG 794

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
edNP_523469.2 V-set 50..147 CDD:462230 19/79 (24%)
Ig 153..249 CDD:472250 30/98 (31%)
Ig strand B 169..173 CDD:409353 1/3 (33%)
Ig strand C 183..187 CDD:409353 2/3 (67%)
Ig strand E 211..215 CDD:409353 1/3 (33%)
Ig strand F 225..230 CDD:409353 1/4 (25%)
Ig strand G 242..245 CDD:409353 1/2 (50%)
Ig_3 253..320 CDD:464046 16/70 (23%)
Ig_3 337..406 CDD:464046 26/84 (31%)
Ig_2 437..>504 CDD:464026 14/98 (14%)
Ig 525..635 CDD:472250 22/157 (14%)
Ig strand B 545..549 CDD:409568 1/3 (33%)
Ig strand C 558..562 CDD:409568 0/4 (0%)
Ig strand E 587..591 CDD:409568 1/3 (33%)
Ig strand F 615..620 CDD:409568 1/4 (25%)
Ig strand G 628..631 CDD:409568 1/2 (50%)
Ig_3 639..724 CDD:464046 17/91 (19%)
FN3 741..848 CDD:238020 8/26 (31%)
Kirrel1XP_011238330.1 Ig 54..148 CDD:472250 18/78 (23%)
Ig strand B 70..74 CDD:409353