DRSC/TRiP Functional Genomics Resources

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Protein Alignment ed and LOC105945909

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_031762429.1 Gene:LOC105945909 / 105945909 -ID:- Length:275 Species:Xenopus tropicalis


Alignment Length:200 Identity:56/200 - (28%)
Similarity:81/200 - (40%) Gaps:50/200 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 VVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENSPD-----FRYNGDVLTLTSVRADHAGN 399
            |||.:..:|..|||.||:.|...||||.....|.  |:.|     ....|..:|:|..|...  .
 Frog    40 VVISNGRKEFIEGDNVTLSCVCDANPAANNFTWY--NNRDKTLELLEEQGRSITVTVGRGRE--T 100

  Fly   400 YICRAVNIMQSQGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHVGNG------VTL--TCSA 456
            :.|.|.|.:         .:|||....|      |....|....|.:.:|      |||  ||.|
 Frog   101 FSCAAGNPL---------GIGNSNALEL------QVLYPPKNVTVSILDGNLDLTNVTLICTCFA 150

  Fly   457 NPPGWPVPQYRWFRDMDGEFSSTQKILAQ-----GPQYSIPKAHLGNEGKYHCHAVNELGIGMMA 516
            .|   .|..|.|:||..|:.::.::..|:     ||:..:          |.|.|.|:||:|..:
 Frog   151 RP---AVKNYTWYRDRQGQVTTFEEQSAEITINIGPEKEL----------YFCSATNQLGVGFSS 202

  Fly   517 TIVLE 521
            .:.|:
 Frog   203 HVDLQ 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845
I-set 146..249 CDD:254352
Ig 168..249 CDD:299845
IGc2 268..323 CDD:197706
Ig_3 341..406 CDD:290638 22/69 (32%)
Ig_2 437..514 CDD:290606 25/89 (28%)
I-set 526..633 CDD:254352
Ig 546..632 CDD:143165
IG_like 654..736 CDD:214653
Ig 656..734 CDD:143165
FN3 741..848 CDD:238020
LOC105945909XP_031762429.1 IG 51..121 CDD:214652 24/88 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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