DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and LOC101884649

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_009298713.1 Gene:LOC101884649 / 101884649 -ID:- Length:490 Species:Danio rerio


Alignment Length:519 Identity:98/519 - (18%)
Similarity:183/519 - (35%) Gaps:135/519 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 CNFFLIALVALSSTTLADESIDTRENADLTLKCRFN-------------------DKYEANDFSF 71
            |..|.::|         .|.|.....:.:.:||||:                   ||::.:....
Zfish    21 CRDFNVSL---------PEKIQALNGSCVIVKCRFDIKESYDKDLTERAAGVWYKDKHDTSSSVV 76

  Fly    72 FWTRWTANPAQFDNVAI-GEVQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRIKAKG--- 132
            |     .:.|...|..| |.:   :|...|.......||::      :..:|::..||:.:|   
Zfish    77 F-----NSSASMQNSFIKGNI---TGKLKDKDCTTVFYDIR------SIHSGQYFFRIEGEGGLK 127

  Fly   133 -------TGADVHQEFHNLTVLTPPHPPVISPGNIAVATEDKPMELTCS--SIGGSPDPTITWYR 188
                   |...|.:...|..||.......:.  |.....|.:.:.|.||  ::..|...|:||  
Zfish   128 WTFTKSNTSVVVIETLENPRVLLYEDKQELH--NQQEVLEGRSVSLRCSAETLCSSSPATLTW-- 188

  Fly   189 EGSNTPLPATVLKGGTKDQP---TNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVN 250
             .|...:|.:   ..:|.|.   ::...:..||.  :...:.|.:..:..:..|...::.||:|.
Zfish   189 -SSTARIPHS---ESSKLQDLIVSDLNFTAAPRH--NRVTFICSISYQLQDNNKTAHSSITLHVQ 247

  Fly   251 YYPRVEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISSS---------LVHTIHR- 305
            |.||:    .|.............|.||..|. |.|.|:.:||.:|:|         |.:|..| 
Zfish   248 YAPRI----SNSSSCNSTNVTVCFCEVDGNPS-PVVEWHLSGRPVSNSSNTFISEERLSNTSLRS 307

  Fly   306 -VSVQDAGKYT----CIADNGLGKTGEQELILDI-----------------------LYPPMVVI 342
             :|:..:..:|    |.:.|..|...:   ||.:                       |....::|
Zfish   308 FISLHQSLTHTNTLLCFSKNTRGNATQ---ILQLTPFSQDRGVHSFSVLIGVAVGVSLIMMCIII 369

  Fly   343 ESKTRE------AEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRYNGDVL--TLTSVRADHAGN 399
            ....:|      .::.||..:   :|.:.| |.:    ||..::. |..:|  .||::....:.:
Zfish   370 YCVRKERCRCLQTKQEDTTGV---ITTDGA-VQL----ENKTEYA-NYIILPPELTTIHPQESLH 425

  Fly   400 YICRAVNIMQSQGMERSERVGNSTVALLVRHRPG----QAYITPNKPVVHVGNGVTLTCSANPP 459
            |.......::.:..|..|:...:|...::.:..|    ::.:..|:|.:.....:|....:|.|
Zfish   426 YASVEFKNIKQESKEMKEKSSLTTDYAVINYSGGVTETESSVGGNQPSIAPSTVMTYQKDSNIP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 22/126 (17%)
I-set 146..249 CDD:254352 21/107 (20%)
Ig 168..249 CDD:299845 17/85 (20%)
IGc2 268..323 CDD:197706 18/69 (26%)
Ig_3 341..406 CDD:290638 14/72 (19%)
Ig_2 437..514 CDD:290606 5/23 (22%)
I-set 526..633 CDD:254352
Ig 546..632 CDD:143165
IG_like 654..736 CDD:214653
Ig 656..734 CDD:143165
FN3 741..848 CDD:238020
LOC101884649XP_009298713.1 Ig 24..139 CDD:299845 24/137 (18%)
Ig <264..343 CDD:299845 21/82 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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