DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and kirrel1b

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_017212964.1 Gene:kirrel1b / 100170816 ZFINID:ZDB-GENE-070912-173 Length:801 Species:Danio rerio


Alignment Length:856 Identity:198/856 - (23%)
Similarity:307/856 - (35%) Gaps:260/856 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ADESIDTRENADLTLKCRFNDKYEANDFSFFWT---RWTANPAQFDNVAIG---EVQLSSGYRLD 100
            ||:|:...|.  :.|.|          ..|.:|   :||.     |.:|:|   :::....||:.
Zfish    32 ADQSVVIGER--VVLSC----------VVFNYTGIVQWTK-----DGLALGIGEDLRAWPRYRVL 79

  Fly   101 FQPERGIYDLQIKNVSYNRDNGRFECRIKAKGTGADVHQEFHNLTVLTPPHPPVISPGNIAVATE 165
            ...:.|.|:|:|.:.... |:..:||    :.|.|.:......||||.||..|||......:.|.
Zfish    80 RIMDVGQYNLEITSADLT-DDSLYEC----QATEAALRSRRAKLTVLIPPDGPVIEGSPEILLTA 139

  Fly   166 DKPMELTCSSIGGSPDPTITWYR-----EGSNTPLPATVLKGGTKDQPTNATLSIIPRREDDGAK 225
            .....|||.|.|..|..||.||:     ||::|   :|.:....|...|.:.|.|.|...|.|..
Zfish   140 GTSFNLTCVSRGAKPMSTIEWYKDGIIVEGAHT---STEVLSDRKRVTTKSFLEIQPMDTDTGRN 201

  Fly   226 YKCVVRNRAMNEGKRLEATATLNVNYYPRV--EVGPENPLRVERDRTAKLECNVDAKPKVPNVRW 288
            :.||..|.|...|||  :|.|||:::.|.|  .:.|.:.|..||   .|..|...|.|.:...||
Zfish   202 FTCVASNLAAPLGKR--STVTLNIHHPPTVILSIEPRSVLEGER---VKFTCQATANPPIMGYRW 261

  Fly   289 NRNGRFISSSLVHTIHRVSV----QDAGKYT----CIADNGLGKTGEQELILDILYPPMVVIESK 345
            .:.|..:..:      |.||    .|...:|    |:..|.:|.| ...:::|:.:.|::|:|.:
Zfish   262 AKGGVILDGA------RESVFETTADHSFFTEPVSCLVFNAVGST-NVSILVDVHFGPILVVEPR 319

  Fly   346 TREAEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRYNGDVLTLTSVRADHAGNYICRAVNIMQS 410
            ....:....||:.|..:.|| |:|:.|.|:.|.....|.:.|.|.||....||.|:|:|  |:..
Zfish   320 PVTVDVDSDVTLNCKWSGNP-PLTLTWTKKGSSMVLSNSNQLFLKSVSQADAGQYVCKA--IVPR 381

  Fly   411 QGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHV--GNGVTLTC---SANPPG---WPVPQYR 467
            .|      ||.:.|.|.|...|    |..::|:.:.  |....:.|   |..||.   |...:..
Zfish   382 IG------VGETEVTLTVNGPP----IISSEPIQYAVRGEKGEIKCYIASTPPPDKIVWAWKENV 436

  Fly   468 WFRD-------------------------------MDGEFSSTQKILAQGPQYSIPKAHLGNEGK 501
            |.::                               |:.:|.||                      
Zfish   437 WEKERGTLLERYTVEQSRPATQGGAVLSTLTINNVMEADFQST---------------------- 479

  Fly   502 YHCHAVNELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYT-VTCSAKGKPAPSV------ 559
            |:|.|.|..|.|.| .|.||               ...:|..|.. |...|.|....|:      
Zfish   480 YNCTAWNAFGPGTM-IITLE---------------ETDIASEDIVPVGVIAGGSVGSSILLLLLL 528

  Fly   560 -----------KWLKDAVEILPEENLYEVQTNPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDR 613
                       |..:..|.:.|:   .:|:|         |..::.|:....:......:|   :
Zfish   529 FALIFYLYRQRKSSRRGVTLKPD---IKVET---------VNKETNLEEEAASASTATRMV---K 578

  Fly   614 GLYTCLYQNEVNSANSSMQLRIEHEPIVLHQYNKVAFDIR---ETAEVVCKVQAYPKPEFQWQFG 675
            .:|:.|         .|:.|....:|.      |...|::   :|..:..||:.|...:      
Zfish   579 AMYSFL---------PSVSLSPSTQPF------KDDMDLKQDLQTETLEPKVEEYEAKD------ 622

  Fly   676 NNPSPLTMSSDGHYEISTTTDNNDIYTSVLKINSLTHSDY-----------------------GE 717
                    .::|:|.:..|| ::::.:|.   .||.:.::                       |.
Zfish   623 --------PTNGYYNVRATT-HDEVRSST---RSLLYQEFRAPNPASVSASTGGPANIHPAPTGR 675

  Fly   718 Y----TCRVA-NTLDTIRAPIRLQQKGPPEKPTNLRATEVGHNYVSLSWD-PGFDGGLSKTK--F 774
            |    |.|:| ||........|..|..||..|            ||.:.| |...|.|..|.  .
Zfish   676 YEARPTSRMAHNTYAHFNTIARASQIQPPANP------------VSKTTDYPAERGLLESTNPLA 728

  Fly   775 FVSYRRVAMPR 785
            |.||.....|:
Zfish   729 FDSYAYSTTPQ 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 23/102 (23%)
I-set 146..249 CDD:254352 39/107 (36%)
Ig 168..249 CDD:299845 31/85 (36%)
IGc2 268..323 CDD:197706 14/62 (23%)
Ig_3 341..406 CDD:290638 22/64 (34%)
Ig_2 437..514 CDD:290606 18/115 (16%)
I-set 526..633 CDD:254352 17/124 (14%)
Ig 546..632 CDD:143165 15/103 (15%)
IG_like 654..736 CDD:214653 19/109 (17%)
Ig 656..734 CDD:143165 17/105 (16%)
FN3 741..848 CDD:238020 13/48 (27%)
kirrel1bXP_017212964.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582422
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.