DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ed and si:dkey-27j5.8

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_021333359.1 Gene:si:dkey-27j5.8 / 100150193 ZFINID:ZDB-GENE-121214-156 Length:615 Species:Danio rerio


Alignment Length:721 Identity:151/721 - (20%)
Similarity:268/721 - (37%) Gaps:145/721 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RAATTICNFFLIALVALSS----TTLADESIDTRENADLTLKCRFNDKYEANDFSFFWTRWTANP 80
            |.|..:...||:.:..:|:    ...:...|...:|:.:|:.|.|.  |....:......|..:.
Zfish     6 RMAPALHLIFLLIIHRVSAAGWGVNYSPSQICALQNSTMTISCNFT--YPTTGYQIMKVFWNKDQ 68

  Fly    81 AQFDNVAIGE--VQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRIK-AKGTGADVHQEFH 142
            .::|    ||  ..||:.:.         |..:::.:...:.|    |.:: :..|..|.|..:.
Zfish    69 EKYD----GENFADLSNNFE---------YSQRLQYLGDKQQN----CTVRLSHVTKKDEHDYYF 116

  Fly   143 ----NLT----------VLTPPHPPVISPGNIAVATEDKPMELTC-SSIGGSPDPTITWYREGSN 192
                |:|          ||:.....:.||..:   ||...:.||| ||...:..||..|||... 
Zfish   117 RFITNVTGGRLIGIPGVVLSVTDLQLESPERV---TEGDSVRLTCRSSCKLTDTPTFIWYRNSH- 177

  Fly   193 TPLPATVLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRVEV 257
                 |:...|.:     ..:|.:.|.|  ...|.|.|:.:..     :.....|||.|.|...|
Zfish   178 -----TLTNIGDE-----LNISSVSRTE--AGHYSCGVQGQTY-----ISPAVYLNVRYAPDTPV 225

  Fly   258 GPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYTCIADNGL 322
            .......:....:..|.|:.|:.|.. .:.|.:...:::|..:..|.::|...:|:|.|.|.|..
Zfish   226 ISNRSAVIMEGDSVTLNCSSDSNPPA-EINWYKANTYLNSGGIFNISKISSGYSGEYKCRARNDH 289

  Fly   323 GKTGEQELILDILYPPMVVIESKTREA--EEGDTVTIRCNVTANPAPVTIEWLK-ENSPDFRYNG 384
            |:.....:.||:.|||..:..|..|.|  ..||:||:.|:..:|| |..|.|.| |.|.   .:|
Zfish   290 GEKYSDPVTLDVQYPPRNISVSMNRSAVIMSGDSVTLSCSSDSNP-PAEINWYKGETSV---RSG 350

  Fly   385 DVLTLTSVRADHAGNYICRAVNIMQSQGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHVGNG 449
            .:..::.:.:|.:|.|.||..|   ..|.:.|:     .|.|.|::.|....::.........:.
Zfish   351 RIFNISKISSDDSGEYKCRYKN---KYGEKYSD-----PVTLDVQYPPRSVSVSVTDSGQLFSDS 407

  Fly   450 VTLTC--SANPPGWPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHLGNEGKYHCHAVNELGI 512
            |:|.|  .:|||..   .:.||::      :....:..|..:|..::     |:::|.|.|..|.
Zfish   408 VSLMCISDSNPPAL---SFNWFKE------NQSSAVGSGQSFSAVQS-----GRFYCEAHNPHGA 458

  Fly   513 GMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKPAPSVKWLKDAVEILPEENLYEV 577
            .....:.:.:|          :|..|.:..|            |.||..|...:.|:....|:.:
Zfish   459 QRSDAVTVTVH----------EHAERNIIIT------------ATSVGVLIIFIIIIVIIVLFII 501

  Fly   578 QTNPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDRGLYTCLYQNEVNSANSSMQLRIEHEPIVL 642
            :........|::..|:.|.              .|....|.:|.|.|  .:..:.....:|.:  
Zfish   502 KKQRSAKSEGLIVTQNDLY--------------SDVPQKTQVYDNPV--CDPGLADETPYETV-- 548

  Fly   643 HQYNKVAFDIRETAEVVCKVQAYPK-------PEFQWQFGNNPSPLTMSSDGHYEISTTTDNNDI 700
              ..:::.:.|:..|:......|.|       .|.|.|..|  :|:......|.:.:..|....:
Zfish   549 --NPRISAECRDAEEIQYATVQYHKNTPKKKEEEEQRQCDN--TPVQQPDQDHRQENVETVEESV 609

  Fly   701 YTSVLK 706
            ..|:||
Zfish   610 IYSMLK 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 19/113 (17%)
I-set 146..249 CDD:254352 25/103 (24%)
Ig 168..249 CDD:299845 19/81 (23%)
IGc2 268..323 CDD:197706 13/54 (24%)
Ig_3 341..406 CDD:290638 22/67 (33%)
Ig_2 437..514 CDD:290606 15/78 (19%)
I-set 526..633 CDD:254352 17/106 (16%)
Ig 546..632 CDD:143165 14/85 (16%)
IG_like 654..736 CDD:214653 13/60 (22%)
Ig 656..734 CDD:143165 13/58 (22%)
FN3 741..848 CDD:238020
si:dkey-27j5.8XP_021333359.1 Ig 27..118 CDD:325142 18/109 (17%)
IGc2 150..201 CDD:197706 17/63 (27%)
Ig_2 224..301 CDD:316418 16/77 (21%)
Ig_2 315..386 CDD:316418 25/82 (30%)
Ig_2 405..468 CDD:316418 15/76 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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