DRSC/TRiP Functional Genomics Resources

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Protein Alignment ed and LOC100150177

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_017212278.1 Gene:LOC100150177 / 100150177 -ID:- Length:491 Species:Danio rerio


Alignment Length:366 Identity:85/366 - (23%)
Similarity:143/366 - (39%) Gaps:82/366 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 GTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMN----EGKRLEATATLNVNYYPRVEVGPENPL 263
            |.|.:.....||.:.::::....::.|.......    .|.||..|           ::..|:|.
Zfish    91 GDKQENCTVRLSHVTKKDEHVYYFRFVTNVEGQKWIGIPGVRLSVT-----------DLQLESPE 144

  Fly   264 RVERDRTAKLECNVDAK-PKVPNVRWNRNGRF---ISSSLVHTIHRVSVQDAGKYTCIADNGLGK 324
            ||....:.:|.|....| ...|...|.||...   |...|  .|..||.::||.|:|      |.
Zfish   145 RVTEGDSVRLTCKSSCKLTDTPTFIWYRNSHILTNIGDEL--NIRSVSRREAGHYSC------GV 201

  Fly   325 TGE----QELILDILYPP--MVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLK-ENSPDFRY 382
            .|:    ..:.|::.|.|  .|:..|.:....|||:||:.|:..:|| |..|.|.| |.|..   
Zfish   202 QGQTYISPAVYLNVTYAPDTPVISISGSAVIMEGDSVTLSCSSDSNP-PAQISWFKGETSVG--- 262

  Fly   383 NGDVLTLTSVRADHAGNYICRAVNIMQSQGMERSERVGNSTVALLVRHRP--------GQAYITP 439
            :|.:..::.:.:|.:|.|.|.|.|       :..|:: :..|.|.|::.|        |.|.|..
Zfish   263 SGRIFNISKISSDDSGEYKCSARN-------DHGEKI-SDPVTLDVQYPPKSISVSISGSAVIMS 319

  Fly   440 NKPVVHVGNGVTLTC--SANPPGWPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHLGNEGKY 502
            ...:  ..:.|:|.|  .:|||..   .:.||::      :....:..|..:|..::     |::
Zfish   320 GDSL--FSDSVSLMCISDSNPPAL---SFSWFKE------NQSSAVGSGQSFSAVQS-----GRF 368

  Fly   503 HCHAVNELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADT 543
            :|.|.|..|......:.:.:          |||..|.:..|
Zfish   369 YCEAHNPHGAQRSDAVTVTV----------QQHAVRNIVIT 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845
I-set 146..249 CDD:254352 9/49 (18%)
Ig 168..249 CDD:299845 9/49 (18%)
IGc2 268..323 CDD:197706 16/58 (28%)
Ig_3 341..406 CDD:290638 21/65 (32%)
Ig_2 437..514 CDD:290606 16/78 (21%)
I-set 526..633 CDD:254352 5/18 (28%)
Ig 546..632 CDD:143165
IG_like 654..736 CDD:214653
Ig 656..734 CDD:143165
FN3 741..848 CDD:238020
LOC100150177XP_017212278.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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