DRSC/TRiP Functional Genomics Resources

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Protein Alignment ed and LOC100006752

DIOPT Version :9

Sequence 1:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_021333405.1 Gene:LOC100006752 / 100006752 -ID:- Length:385 Species:Danio rerio


Alignment Length:354 Identity:72/354 - (20%)
Similarity:122/354 - (34%) Gaps:96/354 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LIALVALSSTTLADESID-------TRENADLTLKCRFNDKYEANDFSFFWTRWTANPAQFDNVA 87
            ||.|:.:...:.||..::       ..:::.:.:.|.:...........|||:.....|:|    
Zfish    11 LIFLLMIHMVSSADWGVNYSSLHICAVKDSSVIISCTYKYPTVHQLMKVFWTKDPVKGAEF---- 71

  Fly    88 IGEVQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRIK-AKGTGADVHQEFHNL------- 144
               :.||.      .||   |..:::.:...:.|    |.:: :..|..|.|:.:..:       
Zfish    72 ---LDLSE------DPE---YSQRLQYLGDKQQN----CTVRLSHVTEKDKHEYYFRIITDVREE 120

  Fly   145 -------TVLTPPHPPVISPGNIAVATEDKPMELTC-SSIGGSPDPTITWYREGSNTPLPATVLK 201
                   .:|:.....:.||..:   ||...:.||| ||...:..||..|||...      |:.|
Zfish   121 RWIGKPGVILSVTDLQLESPERV---TEGDSVHLTCRSSCNLTDTPTFIWYRNSH------TLTK 176

  Fly   202 GGTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPR---VEVGPENPL 263
            ....|:     |.:.|.|.:|..:|:|.|....:...:     ..|||.|.||   |.......|
Zfish   177 EMIGDK-----LILDPVRREDAGRYRCAVHGHTLTSPE-----VYLNVTYPPRNVSVSTNYSGQL 231

  Fly   264 RVERDRTAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYTCIADNGLGKTGEQ 328
            .:   .:..|.|..|:.|...:..|....:   ||.|.:....|...:|::.|.|.|..|     
Zfish   232 WL---NSVSLMCISDSNPPALSFSWFEENQ---SSAVGSGQSFSAVQSGRFYCEAHNPHG----- 285

  Fly   329 ELILDILYPPMVVIESKTREAEEGDTVTI 357
                                |:..|.||:
Zfish   286 --------------------AQRSDAVTV 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
edNP_001260013.1 Ig 50..147 CDD:299845 16/111 (14%)
I-set 146..249 CDD:254352 26/103 (25%)
Ig 168..249 CDD:299845 21/81 (26%)
IGc2 268..323 CDD:197706 13/54 (24%)
Ig_3 341..406 CDD:290638 4/17 (24%)
Ig_2 437..514 CDD:290606
I-set 526..633 CDD:254352
Ig 546..632 CDD:143165
IG_like 654..736 CDD:214653
Ig 656..734 CDD:143165
FN3 741..848 CDD:238020
LOC100006752XP_021333405.1 Ig 41..133 CDD:325142 17/111 (15%)
Ig_3 139..198 CDD:316449 22/72 (31%)
Ig <183..215 CDD:325142 9/36 (25%)
Ig_2 235..296 CDD:316418 18/88 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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