Protein Alignment fred and nectin3a

DIOPT Version :10

• Sequence 1: NP_608812.3
• Gene: fred / 33613
• FlyBaseID: FBgn0051774
• Length: 1447
• Species: Drosophila melanogaster
• Sequence 2: XP_073779583.1
• Gene: nectin3a / 793240
• ZFINID: ZDB-GENE-130530-670
• Length: 644
• Species: Danio rerio
• Alignment Length: 497
• Identity: 111/497 - (22%)
• Similarity: 188/497 - (37%)
• Gaps: 114/497 - (22%)

  Fly    30 GVDLVLKCRFTEHYDSTDFTFYWARW-------TCCPTLFENVAIGDVQLNSNYRLDF-RPSRGI 86
            |.::.|.||...   |::.:...:.|       .....:|..|....|....:.|:.| :||  :
Zfish    48 GKNVTLSCRMEM---SSNLSLTQSSWERHLPSGIITLAVFNPVYGTSVADEYSRRVHFLKPS--V 107

  Fly    87 YDLQI--KNTSYNRDNGRFECRIKAKGTGADVHQEFYNLTVLTAPHPPMVTPGNLAVATEE-KPL 148
            :|:.|  :...: .|.|.:.|::.....|.  .|...|:.|:..| ...|:||:|::..:: :.|
Zfish   108 HDVSIVLQGVGF-ADIGMYTCKMVTFELGN--MQASTNVDVMVEP-KVYVSPGSLSLTADDGETL 168

  Fly   149 ELTCSSIGGSPDPMITWYREGSTVPLQSYALKGGSKNHYTNATL---QIVPRRADDGAKYKCVVW 210
            ..||::..|.|...:.|   .|.:|.|: |:...|:...|..||   .:.|.||..|....|||.
Zfish   169 VATCTAERGRPAAEVFW---ESDLPGQT-AVVTQSEPEGTTTTLVHYVLAPTRASHGRSLSCVVR 229

  Fly   211 NRAMPEGHMLETSVTLNVNYYPRVEV-GPQNPLKVERDHVAKLDCRVDAKPMVSNVRWSR----- 269
            :.|:.....:  ...|||.:.|.|.| |.:|...|.:..| :|||:.:|.|......|:|
Zfish   230 HPALSRDFRI--PYRLNVFFVPDVMVIGGKNVWYVGQKDV-QLDCKANANPPALFYLWTRLDALM 291

  Fly   270 -------NGQYVSATPTHTIYRVNRHHAGKYTCSADNGLGKTGEKDIVLDVLYPP---------I 318
                   ||..|...|      :....:|:|.|...|.:|:... |:...||.||         .
Zfish   292 PAGVNMHNGSLVFTRP------LEATDSGQYRCEVQNDVGQNFH-DVPFLVLDPPPTTAAPTTTT 349

  Fly   319 VFIESKTHEAEEGETVLIRCNVTA--------NPSPINVEWLKEGAPDFRYTGELLTL------- 368
            .|  ||:...:...|:....|..|        :|...::..|..|     ..|.:|.|
Zfish   350 TF--SKSLHPDTSLTITAPINQRAHFSSPTRSSPRDADLSTLVGG-----IVGGILILVLLLALA 407

  Fly   369 GSV----RAEHAGNYICR------------SVNIMQPFSSKRVEGVGNSTVALLVRHRPGQAYIT 417
            |:.    |....|:|..:            .:::::|...:.|.|..:...:..::.:|....|.
Zfish   408 GAFYMRRRRTFRGDYYTKQYIGPSDMQKESQLDVLEPHELQDVYGDDSGNGSQDLKPKPEGDIIY 472

  Fly   418 PNKPVVHV-----GNGVTLTCSA------------NPPGWPV 442
            |:.|..|.     |:.::|...|            ||.|.|:
Zfish   473 PDYPNDHKDTEGWGDNLSLQREASYYSDHHNHHNVNPSGPPL 514

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fred	NP_608812.3	Ig	132..228	CDD:472250	27/99 (27%)
		Ig strand B	148..152	CDD:409353	1/3 (33%)
		Ig strand C	162..166	CDD:409353	0/3 (0%)
		Ig strand E	190..194	CDD:409353	2/6 (33%)
		Ig strand F	204..209	CDD:409353	1/4 (25%)
		Ig strand G	221..224	CDD:409353	0/2 (0%)
		Ig	238..313	CDD:472250	20/86 (23%)
		Ig strand B	250..254	CDD:409353	1/3 (33%)
		Ig strand C	264..268	CDD:409353	0/3 (0%)
		Ig strand E	278..282	CDD:409353	1/3 (33%)
		Ig strand F	292..297	CDD:409353	2/4 (50%)
		Ig strand G	306..309	CDD:409353	0/2 (0%)
		Ig_3	316..385	CDD:464046	18/108 (17%)
		Ig_2	416..501	CDD:464026	11/44 (25%)
		Ig	523..614	CDD:472250
		Ig strand B	524..528	CDD:409568
		Ig strand C	537..541	CDD:409568
		Ig strand E	566..570	CDD:409568
		Ig strand F	594..599	CDD:409568
		Ig strand G	607..610	CDD:409568
		Ig_3	618..703	CDD:464046
		FN3	720..838	CDD:238020
nectin3a	XP_073779583.1	None