DRSC/TRiP Functional Genomics Resources

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Protein Alignment fred and kirrel3b

DIOPT Version :10

Sequence 1:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster
Sequence 2:XP_021323594.1 Gene:kirrel3b / 572369 ZFINID:ZDB-GENE-100713-3 Length:795 Species:Danio rerio


Alignment Length:877 Identity:195/877 - (22%)
Similarity:320/877 - (36%) Gaps:221/877 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LWLSIGLISGDDSLDTREGVDLV--------LKCRFTEHYDSTDFTFYWARWTCCPTLFENVAIG 68
            |||: |  .|.:::.:::..|||        |.|....::.    ...|.|        :.:|:|
Zfish    20 LWLT-G--HGVNAVFSQQPQDLVVVAGQPVTLPCSIPGYHG----VVLWLR--------DGLALG 69

  Fly    69 ---DVQLNSNYRLDFRPSRGIYDLQIKNTSYNRDNGRFECRIKAKGTGADVHQEFYNLTVLTAPH 130
               |:.....|.:......|.:.|:|:.... .|:..|||    :...|.:......||||..|.
Zfish    70 VGRDLSGYPRYAVVGDHGSGEHHLRIQKVEL-MDDAVFEC----QAIQAAMRSRPARLTVLVPPD 129

  Fly   131 PPMVTPGNLAVATEEKPLELTCSSIGGSPDPMITWYREGSTV--PLQSYALKGGSKNHYTNATLQ 193
            .||:|.|.:.......||.|||.:....|...|.|.|.|..:  .:.|..|....:...|.:||.
Zfish   130 DPMITGGPVVSLRAGDPLNLTCHADNAKPAASIIWIRNGEVLNGAMYSKTLLRDGRRESTVSTLY 194

  Fly   194 IVPRRADDGAKYKCVVWNRAMPEGHMLETSVTLNVNYYPRVEVGPQNPLKVERDHVAKLDCRVDA 258
            |.....:.|.|..|...|:|:|.|.  |||||:::.:.|.|.:..: |..|...::.|..|...|
Zfish   195 ISASNIESGQKIICRASNKAVPNGK--ETSVTIDIQHLPLVNLSVE-PQPVLEGNLVKFHCSAKA 256

  Fly   259 KPMVSNVRWSRNGQYVSATPTHTIYRVNRHHA---GKYTCSADNGLGKTGEKDIVLDVLYPPIVF 320
            .|.|:..:|::.|..:......| |.|...|:   ...:|...|.||.|.....| ||.:.|.:.
Zfish   257 NPPVTQYKWAKGGSVIKEVSGDT-YEVIVDHSFFTEPVSCEVTNPLGSTNISRNV-DVYFGPRMA 319

  Fly   321 IESKTHEAEEGETVLIRCNVTANPSPINVEWLKEGAPDFRYTGELLTLGSVRAEHAGNYICRSVN 385
            .|.::.:.:.|...:..|..|.||| :.:.|:|.|:........:|||.|||.|.||.|:||:| 
Zfish   320 AEPQSLQVDLGSDAVFNCAWTGNPS-LTIVWMKRGSGVVLSNENILTLKSVRQEDAGKYVCRAV- 382

  Fly   386 IMQPFSSKRVEGVGNSTVALLVRHRP----GQAYITPNKPVVHVGNGVTLTC---SANPP---GW 440
                  ..|| |.....|:|.|...|    .|.:..|:      |....:.|   |..||   .|
Zfish   383 ------VPRV-GAAEKEVSLTVNGPPTISSTQTHQAPH------GEKGQIKCFIRSTPPPDRIAW 434

  Fly   441 PVPQYRWFRDMDGDIGNTQKILAQGPQYSIPKAHLGSEGKYHCHAVN-ELGIGKIATIILEVHQP 504
                 .|          .:.:|..           |:.|:|....|: |.|:  ::|:.:....|
Zfish   435 -----SW----------KETVLES-----------GTSGRYTVETVSTEDGV--LSTLTMSNIVP 471

  Fly   505 PQFLAKLQQHMTRRVGDVDYAVTC-SAKGKPTPQIRWIKDG--TEILPTRKMFDIRTTPTDAGGG 566
            ..|             ...|..|. ::.|..|..||..:.|  .:.||...:..:      |.|.
Zfish   472 ADF-------------QTIYNCTAWNSFGSDTEIIRLKEQGGSQDSLPVAVIIGV------AVGA 517

  Fly   567 VVAVQSILRFRG------KARPNGNQLLPNDRGLY-------TCLYENDVNS----------ANS 608
            .||...::...|      ..|.....|...|..|.       .|..:.::.|          .::
Zfish   518 FVAFIVLMGTIGAFCCTRSQRKKSAHLCTEDAHLVMPTLPTSICAQQRELASKIKTENLKGVVSA 582

  Fly   609 SMHLRIEHEPIVIHQYNKVAYDLRESAE------------------VVCRVQAYPKPEFQWQYGN 655
            ...:|:|    ::|:.:..|   |||.|                  |:.:::...:.|.::|:..
Zfish   583 KNDIRVE----IVHKDHNAA---RESEEHSGMKQLMIERGEFQQESVLKQLEVLQEEEKEYQHIK 640

  Fly   656 NPSPLTMSSDGHYEISTRMENNDVYTSILRIAHLQHSDYGEYICRAVNPLDSIRAPIRLQPKGSP 720
            :|      ::|:|.::|..|::...|::                 |.|....:|........|..
Zfish   641 DP------TNGYYSVNTFKEHHGTPTTM-----------------AGNQTTELRRDPATATTGKQ 682

  Fly   721 EKPTNLKILEVGHNYAVLNWTPG------------------------FNGGFMSTKYLVSYRRVA 761
            ..||.:....:   |:.|...|.                        |..|.||.    |...:.
Zfish   683 RVPTGMSFTNI---YSTLGAGPNRLYDYSQRFVLGMGSSSIELCEREFQRGSMSD----SSSFLD 740

  Fly   762 TPREQTLSDCS-GNGYIPSYQIS-SSSSNSNH 791
            |..:.::|..| .:||:...:.| :|:|:|:|
Zfish   741 TQCDSSVSSYSKQDGYVQFDKDSKASASSSSH 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fredNP_608812.3 Ig 132..228 CDD:472250 32/97 (33%)
Ig strand B 148..152 CDD:409353 2/3 (67%)
Ig strand C 162..166 CDD:409353 1/3 (33%)
Ig strand E 190..194 CDD:409353 2/3 (67%)
Ig strand F 204..209 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 2/2 (100%)
Ig 238..313 CDD:472250 19/77 (25%)
Ig strand B 250..254 CDD:409353 1/3 (33%)
Ig strand C 264..268 CDD:409353 0/3 (0%)
Ig strand E 278..282 CDD:409353 0/3 (0%)
Ig strand F 292..297 CDD:409353 1/4 (25%)
Ig strand G 306..309 CDD:409353 0/2 (0%)
Ig_3 316..385 CDD:464046 23/68 (34%)
Ig_2 416..501 CDD:464026 16/91 (18%)
Ig 523..614 CDD:472250 20/116 (17%)
Ig strand B 524..528 CDD:409568 1/3 (33%)
Ig strand C 537..541 CDD:409568 2/3 (67%)
Ig strand E 566..570 CDD:409568 1/3 (33%)
Ig strand F 594..599 CDD:409568 2/11 (18%)
Ig strand G 607..610 CDD:409568 0/2 (0%)
Ig_3 618..703 CDD:464046 16/102 (16%)
FN3 720..838 CDD:238020 20/98 (20%)
kirrel3bXP_021323594.1 IG_like 35..124 CDD:214653 20/105 (19%)
Ig strand B 46..50 CDD:409389 1/3 (33%)
Ig strand C 58..62 CDD:409389 0/3 (0%)
Ig strand E 87..95 CDD:409389 2/7 (29%)
Ig strand F 105..110 CDD:409389 3/8 (38%)
Ig strand G 117..120 CDD:409389 0/2 (0%)
IgI_2_KIRREL3-like 130..227 CDD:409416 32/98 (33%)
Ig strand A 131..134 CDD:409416 2/2 (100%)
Ig strand A' 137..141 CDD:409416 0/3 (0%)
Ig strand B 148..155 CDD:409416 3/6 (50%)
Ig strand C 160..165 CDD:409416 1/4 (25%)
Ig strand C' 168..170 CDD:409416 1/1 (100%)
Ig strand D 173..180 CDD:409416 1/6 (17%)
Ig strand E 187..195 CDD:409416 3/7 (43%)
Ig strand F 204..212 CDD:409416 2/7 (29%)
Ig strand G 218..224 CDD:409416 4/7 (57%)
Ig_2 235..312 CDD:464026 19/79 (24%)
Ig 316..397 CDD:472250 29/89 (33%)
Ig strand B 333..337 CDD:409549 0/3 (0%)
Ig strand C 346..350 CDD:409549 0/3 (0%)
Ig strand E 362..366 CDD:409549 1/3 (33%)
IgI_5_KIRREL3 399..496 CDD:409479 26/143 (18%)
Ig strand A 400..404 CDD:409479 1/3 (33%)
Ig strand A' 406..409 CDD:409479 1/2 (50%)
Ig strand B 417..424 CDD:409479 1/6 (17%)
Ig strand C 431..436 CDD:409479 1/9 (11%)
Ig strand C' 438..441 CDD:409479 0/2 (0%)
Ig strand D 449..456 CDD:409479 2/6 (33%)
Ig strand E 459..466 CDD:409479 2/8 (25%)
Ig strand F 477..484 CDD:409479 2/6 (33%)
Ig strand G 487..494 CDD:409479 2/6 (33%)

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