DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fred and kirre

DIOPT Version :10

Sequence 1:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster
Sequence 2:NP_525059.2 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster


Alignment Length:1284 Identity:261/1284 - (20%)
Similarity:385/1284 - (29%) Gaps:515/1284 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GVDLVLKCRFTEHYDSTDFTFYWARWTCCPTLFENVAIGD----------VQLNSNYRLDFRPSR 84
            |..:.|.||..|...:       .:||     .::..:|.          ..:.|:...||  |.
  Fly    96 GSRVTLPCRVMEKVGA-------LQWT-----KDDFGLGQHRNLSGFERYSMVGSDEEGDF--SL 146

  Fly    85 GIYDLQIKNTSYNRDNGRFECRIKAKGTGAD----VHQEFYNLTVLTAPHPPMVTPGNLAVATEE 145
            .||.|.:.      |:.:::|::   |.|..    :...|..||||..|..|.:|.|:..|.||:
  Fly   147 DIYPLMLD------DDAKYQCQV---GPGPQGEQGIRSRFAKLTVLVPPEAPKITQGDYLVTTED 202

  Fly   146 KPLELTCSSIGGSPDPMITWYREGSTVPLQSYALKG---------GSKNHYTNATLQIVPRRADD 201
            :.:||.|.|.||.|...|||. :|    |.:...||         .|:.....:.|::.|::...
  Fly   203 REIELECVSQGGKPAAEITWI-DG----LGNVLTKGIEYVKEPLADSRRITARSILKLAPKKEHH 262

  Fly   202 GAKYKCVVWNRAMPEGHMLETSVTLNVNYYPRVEV----GPQNPLKVERDHVAKLDCRVDAKPMV 262
            ...:.|...|.|  :.......:.|.|.|.|:|.|    |.....|:.......|.|:.||.|..
  Fly   263 NTTFTCQAQNTA--DRTYRSAKLLLEVKYAPKVIVSVVGGALAGGKIPEGAEVILSCQADANPHE 325

  Fly   263 SNVRWSRNGQYVSA--TPTHTIYRVNR-HHAGKYTCSADNGLGKTGEKDIVLDVLYPPIVFIESK 324
            .:.||..|.:.::.  |....|:.|:| :|.....|...|.:||: |:...||:.:.|:......
  Fly   326 LSYRWFINDELMTGDFTTKMIIHNVSRQYHDAIVKCEVVNAVGKS-EQSKKLDISFGPVFRQRPV 389

  Fly   325 THEAEEGETVLIRCNVTANPSPINVEWLKEGAPDFRYTGELLTLGSVRAEHAGNYICRSVNIMQP 389
            :.||:.|.||.:||:|..||.| .:||:.|.:.........|.| .|.:|.||.|.|::|     
  Fly   390 SVEADLGATVSMRCDVAGNPEP-EIEWISENSDQVVGVAAELKL-KVSSETAGRYFCKAV----- 447

  Fly   390 FSSKRVEG---VGNSTVALLVRHRPGQAYITPNK-PVVHVGNGVTLTCSANPPGWPVPQYR---W 447
                 |.|   :| :...|.|:..|   .||.:| ....||..|.:.|.|    :.:|:..   |
  Fly   448 -----VNGFPEIG-AEATLYVKRAP---IITSHKVQFGGVGGRVKIDCLA----FSIPKAEHILW 499

  Fly   448 FRDMDGDIGNTQKILAQGPQYSIPKAHLGSE---------------GKYHCHAVNELGIGKIATI 497
              ..:|.|.|...  |....|...:.||...               |||:|..:|..|...:...
  Fly   500 --SFEGKIINMSS--ADPDIYIFEEHHLPEGVRAALIIRDSKATHFGKYNCTVMNSYGGDSLVIT 560

  Fly   498 ILEVHQPPQFLAKLQQHMTRRVGDVDYAVTCSAKGKPTPQIRWIKDGTEILPTRKMFDIRTTPTD 562
            :|                 |..|::...:....                     .||.:...   
  Fly   561 LL-----------------REPGNIPVLLVVMG---------------------SMFCVAII--- 584

  Fly   563 AGGGVVAVQSILRF---RGKARPNGNQLLPN-DRGLYTCLYENDVNSANSSMHLRIEHEPIVIHQ 623
                ::.|..|:.:   |.:.:|....::|. .||      .:.:|...|.:..:          
  Fly   585 ----LMIVMIIIVYRKRRSRKKPMPADVIPEASRG------GDKLNELKSELRSK---------- 629

  Fly   624 YNKVAYDLRESAE----VVCRVQAYPKPEFQWQYGNNPSPLTMSSDGHYEISTRMENN---DVYT 681
                |||:..|..    :...:...|.|:.|.:......||.    |..:...|...:   |.|.
  Fly   630 ----AYDVEYSEAGGDGLAINLTQSPMPDVQMKGATLGVPLA----GPVKFDERFSGDFGGDRYN 686

  Fly   682 SILRIAHLQHSDYGEYICRAVNPLDSIRAPIRLQPKGSPEKPTNLKILEVGHNYAVLNWTPGFNG 746
            ....|.:|::.....|                   ||||:                         
  Fly   687 RQCHIKNLKNQQETAY-------------------KGSPQ------------------------- 707

  Fly   747 GFMSTKYLVSYRRVATPREQTLSDCSGNGYIPSYQISSSSSNSNHEWIEFNCFKENPCKLAPLDQ 811
                                      .|||...::                              
  Fly   708 --------------------------ANGYAHYFE------------------------------ 716

  Fly   812 HQSYMFKVYALNSKGTSGYSNEILATTKVSKIPPPLHVSYDPNSHVLGINVAATCLSLIAVVESL 876
                    |||:      ||             ||            |...||            
  Fly   717 --------YALD------YS-------------PP------------GGEGAA------------ 730

  Fly   877 VTRDATVPMWEIVETLTLLPSGSETTFKEAIINHVSRPAHYTTATTSGRSLGVGGGSHLGEDRTM 941
                            .::.||.....|...:|..:.| |...||.:|...|.|||:.|..    
  Fly   731 ----------------VVVGSGGVGKLKNGGMNSATLP-HSAAATVNGGGAGNGGGASLPR---- 774

  Fly   942 ALAETAGPGPVVRVKLCLRSNHEHCGAYANAEIGKSYMPHKSSMTTSALVAIIIASLSFVVFLG- 1005
                                |..|       ||.:|...:.                    ||| 
  Fly   775 --------------------NQRH-------EIQQSQQSNG--------------------FLGQ 792

  Fly  1006 -LLYAFCHCRRKHAAKKESSSVGGGVGGGNANATANPGSTGAKEYDLDLDASRRPSLSQDPQQSQ 1069
             ||        ::......|::.|           ||       | |..::|..|.|   |..|.
  Fly   793 PLL--------QNGIDSRFSAIYG-----------NP-------Y-LRTNSSLLPPL---PPPST 827

  Fly  1070 QQP---PPPPPYYPTGTLDSKDIGNGNGGMELTLTALHDPDEQLNMQQQQHHSNHGQYQ------ 1125
            ..|   |.||||:                     .|.|.         ..||:|.|...      
  Fly   828 ANPAATPAPPPYH---------------------AARHG---------HAHHANGGLKHFVGGAV 862

  Fly  1126 ---QPKAILGIYGGVAGSGGNNSGGQHPHSNGYGYHVTSAIGVDSDSYQVLPSVANSAAGSHGHG 1187
               .|...:.|.|| .|.|...|||     .|.|      :||              |||  |..
  Fly   863 ITTSPVGNVNINGG-GGGGSTPSGG-----GGVG------VGV--------------AAG--GSV 899

  Fly  1188 SGHGHGLGAGESGPLEATPPTCNISGGSSSNSGINPMQQQHSARANLTN 1236
            ||....|.| .|..|.|||    ::||...|||  ...|..|.:..|:|
  Fly   900 SGSSSNLTA-SSNTLAATP----LAGGGVGNSG--QCAQSPSGQFILSN 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fredNP_608812.3 Ig 132..228 CDD:472250 27/104 (26%)
Ig strand B 148..152 CDD:409353 2/3 (67%)
Ig strand C 162..166 CDD:409353 2/3 (67%)
Ig strand E 190..194 CDD:409353 1/3 (33%)
Ig strand F 204..209 CDD:409353 1/4 (25%)
Ig strand G 221..224 CDD:409353 0/2 (0%)
Ig 238..313 CDD:472250 20/77 (26%)
Ig strand B 250..254 CDD:409353 1/3 (33%)
Ig strand C 264..268 CDD:409353 1/3 (33%)
Ig strand E 278..282 CDD:409353 0/3 (0%)
Ig strand F 292..297 CDD:409353 1/4 (25%)
Ig strand G 306..309 CDD:409353 1/2 (50%)
Ig_3 316..385 CDD:464046 23/68 (34%)
Ig_2 416..501 CDD:464026 24/103 (23%)
Ig 523..614 CDD:472250 11/94 (12%)
Ig strand B 524..528 CDD:409568 0/3 (0%)
Ig strand C 537..541 CDD:409568 0/3 (0%)
Ig strand E 566..570 CDD:409568 0/3 (0%)
Ig strand F 594..599 CDD:409568 0/4 (0%)
Ig strand G 607..610 CDD:409568 1/2 (50%)
Ig_3 618..703 CDD:464046 16/91 (18%)
FN3 720..838 CDD:238020 9/117 (8%)
kirreNP_525059.2 IG_like 88..182 CDD:214653 21/108 (19%)
Ig strand B 99..103 CDD:409552 1/3 (33%)
Ig strand E 144..148 CDD:409552 2/5 (40%)
Ig strand F 158..163 CDD:409552 1/4 (25%)
C2-set_2 189..279 CDD:400489 26/96 (27%)
Ig strand C 219..223 CDD:409416 2/3 (67%)
Ig strand E 251..255 CDD:409416 1/3 (33%)
Ig strand F 265..270 CDD:409416 1/4 (25%)
Ig strand G 280..283 CDD:409416 0/2 (0%)
Ig_2 307..379 CDD:464026 20/72 (28%)
Ig 382..462 CDD:472250 28/92 (30%)
Ig strand B 399..403 CDD:409353 1/3 (33%)
Ig strand C 412..417 CDD:409353 2/4 (50%)
Ig strand F 441..446 CDD:409353 2/4 (50%)
Ig strand G 455..458 CDD:409353 1/3 (33%)
Ig 466..561 CDD:472250 24/105 (23%)
Ig strand B 482..486 CDD:409353 1/3 (33%)
Ig strand C 496..500 CDD:409353 1/5 (20%)
Ig strand E 529..533 CDD:409353 0/3 (0%)
Ig strand F 543..548 CDD:409353 3/4 (75%)
Ig strand G 556..559 CDD:409353 0/2 (0%)

Return to query results.
Submit another query.