Sequence 1: | NP_608812.3 | Gene: | fred / 33613 | FlyBaseID: | FBgn0051774 | Length: | 1447 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017447235.1 | Gene: | Siglec1 / 311426 | RGDID: | 1311953 | Length: | 1708 | Species: | Rattus norvegicus |
Alignment Length: | 958 | Identity: | 200/958 - (20%) |
---|---|---|---|
Similarity: | 333/958 - (34%) | Gaps: | 249/958 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 DTREGVDLVLKC----------RFTEHYDSTDFTFYWARWTCCPTLFENVAIGDVQLNSNYRLDF 80
Fly 81 RPSRGIYDLQIKNTSYNRDNGRFECRIKAKGTGADVHQEFYNLTVLTAPHPPM------------ 133
Fly 134 VTPGNLAVATEEKPLELTCSSIGGSPD-PMITWYREGSTVPLQSYALKGGSKNHYTNATLQIVPR 197
Fly 198 RADDGAKYKCVVWNRAMPEGHMLETSVTLNVNYYPRVEVGPQNPLKVERDHVAKLDCRVDAKPMV 262
Fly 263 SNVRWSRNGQYV--SATPTHTIYRVNRHHAGKYTCSADNGLGKTGEKDIVLDVLYPPIVFIESKT 325
Fly 326 HEAEEGETVLIRCNVTANPSPINVEWLKEGAPDFRYTGELLTLGSVRAEH----------AGNYI 380
Fly 381 CRSVNIMQP-----FSSKRVEGVGNSTVALLVRHRPGQAYITPNKPVVHVGNGVTLTCSA--NPP 438
Fly 439 GWPVPQYRWFRD----MDGDIGNTQKILAQGPQYSIPKAHLGSEGKYHCHA-VNELGIGKIATII 498
Fly 499 LEVHQPPQ---FLAKLQQHMTRRVGDVD---YAVTCSAKGKPTPQIRWIKDGTEILPTRKMFDIR 557
Fly 558 TTPTDAGGGVVAVQSILRFRGKARPNGNQL-------LPNDRGLYTCLYENDVNSANSSMHLRIE 615
Fly 616 HEPIVIHQYNKVAYDLRESAE--VVCRVQ---AYPKPEFQWQYGNNPSPLTMSSDGHYEISTRME 675
Fly 676 NNDVYT----SILRIAHLQHSDYGEYICRAVNPLDS-IRAPIRLQPKGSPEKPTNLKILEVGHNY 735
Fly 736 -AVLNWTPG---------FNGGFMSTKYL----VSYRRV---ATP-------REQTLSDCSGNGY 776
Fly 777 IPSYQISSSSSNS-----NHEWIEFNCFKE--------NPCKL----------------APLDQH 812
Fly 813 QSYMFKVYALNSKGTSGYSNEILA-TTKVSKIPPP--LHVSYDPNSHV 857 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fred | NP_608812.3 | Ig | 29..126 | CDD:299845 | 17/106 (16%) |
IG_like | 141..228 | CDD:214653 | 16/87 (18%) | ||
Ig | 147..228 | CDD:299845 | 16/81 (20%) | ||
I-set | 232..313 | CDD:254352 | 18/82 (22%) | ||
IGc2 | 250..302 | CDD:197706 | 12/53 (23%) | ||
IG_like | 323..385 | CDD:214653 | 15/71 (21%) | ||
IGc2 | 330..385 | CDD:197706 | 14/64 (22%) | ||
Ig_2 | 416..501 | CDD:290606 | 24/91 (26%) | ||
IG_like | 418..501 | CDD:214653 | 23/89 (26%) | ||
I-set | 505..612 | CDD:254352 | 26/119 (22%) | ||
Ig | 526..611 | CDD:143165 | 19/91 (21%) | ||
IG_like | 633..715 | CDD:214653 | 17/91 (19%) | ||
Ig | 635..713 | CDD:143165 | 16/87 (18%) | ||
FN3 | 720..838 | CDD:238020 | 33/171 (19%) | ||
Siglec1 | XP_017447235.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D35531at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |