DRSC/TRiP Functional Genomics Resources

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Protein Alignment fred and LOC1280362

DIOPT Version :10

Sequence 1:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster
Sequence 2:XP_061509780.1 Gene:LOC1280362 / 1280362 VectorBaseID:AGAMI1_005401 Length:1667 Species:Anopheles gambiae


Alignment Length:1680 Identity:368/1680 - (21%)
Similarity:551/1680 - (32%) Gaps:508/1680 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 REGVDLVLKCRFTEHYDS-TDFTFYWARWTCCPTLFENVAIGDVQLNSNYRLDFRPSRGIYDLQI 91
            |||.||.:.|   |.|.: .:....|.|  ....:.:|:.:.:             ..|:|  .:
Mosquito   155 REGQDLQVVC---EVYGARPEPVISWHR--SGRVVRDNLVVEE-------------HNGLY--TV 199

  Fly    92 KNT-----SYNRDNGRFECRIKAKGTGADVHQEFYNLTVLTAPHPPMVTPGNLAVATEEKPLE-- 149
            |:|     |.......:.||::.|.....|..:|: :.:...|     |..||: ..|...::  
Mosquito   200 KSTLSLTLSRQELGATYNCRVEMKDLKLSVDNQFH-IDLQVRP-----TKINLS-GVEHHTVQGT 257

  Fly   150 ---LTCSSIGGSPDPMITWYREGSTVPLQSYALKG-GSKNHYTN-ATLQIVPR------RADDGA 203
               |.|...|..|...:|||.....:..:|..:.. .:|.:..| .|.:.:.:      |.::||
Mosquito   258 KVLLQCQVSGARPAANMTWYNSSKLITEESSEMTSINTKTYLQNDGTFETISQMIFTATRFENGA 322

  Fly   204 KYKCVVWNRAMPE--GHMLETSVTLNVNYYPRVEVGPQNPLKVERDHVAKLDCRVDAKP-MVSNV 265
            ..:|...|..|.|  ...|..::||.|.|.|.|.|.|:| :.|.......:.|..:|.| .:.:|
Mosquito   323 SMRCEADNIVMREDMDRPLHDTLTLEVMYPPVVSVKPEN-ITVNETQDFLIFCDYEANPASLESV 386

  Fly   266 RWSRNGQ--------YVSATPTHT---IYRVNRHHAGKYTCSADNGLG-KTGEKDIVLDVLYPPI 318
            :|.||.|        |....|..|   |....||..|.|||...|.:| ...:.::.:||:|.|.
Mosquito   387 KWYRNSQEIKLNSVRYEGGNPEQTALLIKNSTRHDIGAYTCELSNSIGFDVSDNEVYVDVIYKPT 451

  Fly   319 VFI----ESKTHEAEEGETVLIRCN-VTANPSPI-NVEWLKEGAPDFRYTGEL------------ 365
            |.:    |:...|.::....|: || |..||..: .|.|..:|    .:..||            
Mosquito   452 VMLTMDPEAPVIENDQANITLL-CNIVDGNPMLLTKVRWFLDG----EFLKELPECEEETLGTDE 511

  Fly   366 ---------LTLGSVRAEHAGNYICRSVNIMQPFSSKRVEGVGNSTV--ALLVRHRPGQAYITPN 419
                     :.|.:|..|..|||.|...|         ..|.|:.:.  .|.|.:.||.|.:...
Mosquito   512 NLCEVDPSKMLLQNVGREFIGNYSCEGFN---------AAGWGDVSEENPLDVYYEPGNASMVHY 567

  Fly   420 KPVVHVGNGVTLTCSANPPGWP-VPQYRWFRDMDGDIGNTQKILAQGPQYSIPKAHLGSEGKYHC 483
            ..:......||..||....|.| ..:|||.|      |....:....|.:::....|.|...:.|
Mosquito   568 PYIAIKRRSVTFNCSIEDRGNPAATRYRWLR------GGKPVLDVVTPSWTVDPVGLDSRTTFSC 626

  Fly   484 HAVNELGIGKIATIILEVHQPPQFLAKLQQHMTRRVGDVDYAVTCSAKGKPTPQIRWIKDGTEIL 548
            .|.||.|.|..|.:.||||.||.|:.|||.:........:.:::|..:..|:..|.|.|||..|.
Mosquito   627 FAYNEGGEGYPAEVNLEVHAPPAFIQKLQPYTGALFSTANMSLSCRVECIPSCSISWFKDGIGID 691

  Fly   549 PTRKMFDIRTT--PTD-AGGGVVAVQSILRFRGKARPNGNQLLPNDRGLYTCLYENDVNSA---- 606
            .:.:.:.|..|  |.: |.|...:..|:|.|...|.|||......|...|:|:..|  |||    
Mosquito   692 ESDERYYITNTYLPAEPATGDFESAYSVLHFNMSAWPNGILDRIKDSSNYSCVSTN--NSAGPGV 754

  Fly   607 NSSMHLRIEHEP--------IVIHQYNKVAYDLRESAEVVCRVQAYPKPEFQWQYGNNPSPLTMS 663
            .|:.:..:|:.|        .:..:..|:      ..::||..:|||:|.|.|            
Mosquito   755 RSTTYFGVEYPPENTSLSSTTISVEEGKI------PPKIVCSSRAYPEPAFYW------------ 801

  Fly   664 SDGHYEISTRMENNDVY---TSILRIAHLQHSDYGEYICRAVNP--LDSIRAPIRLQPK------ 717
                    ||  |.::.   ::::....|:.||.|:|.|.|.|.  ..|..|.|.:..|      
Mosquito   802 --------TR--NGEIIAKGSALIVDDVLERSDAGKYTCTAFNKHGNHSTDAYIDIHYKPTCQIM 856

  Fly   718 ---------------GSPEKPTNLKILEVGHNYAVLNWTPGFNGGFMSTKY----LVSYRRVATP 763
                           |||.:             :...|         |.||    |.|:|..:.|
Mosquito   857 RKEVEDEDVLICVATGSPRE-------------SEFEW---------SVKYANDSLQSHRIKSDP 899

  Fly   764 REQ--TLSD-----------CSGN------------GYIPSY----------------------- 780
            .|.  ||.|           .|.|            ||:..:                       
Mosquito   900 YESYLTLDDAVSAMRIYVCVASNNVGMGTPCEIEVAGYVAWWLKGDVLTPYILIGAVAALLLAVI 964

  Fly   781 ---------------QISSSSSNSNHEWIEFNCFKENPCKLAPLD-----QH--QSYMFKVYALN 823
                           |..||......|..||:..|:..|.....|     :|  ||..:::....
Mosquito   965 LVCIIIICICRRKRRQEKSSMHMEEIEDAEFSFMKDRRCLQRETDASENIRHYDQSLRWRIRRFF 1029

  Fly   824 SKGTS------GYSNEILATTKVSKIPPPLHVSYDPNSHVLGINVAATCLSLIAVVESLVTRDAT 882
            .|..|      ..||.|....|...||     :.||:......:.||....  |...:....:||
Mosquito  1030 EKRNSIDLLRISTSNVITYVKKPQTIP-----TEDPSPPTSTPSAAAAAAP--ATPTAATADNAT 1087

  Fly   883 VPMWEIVETLTLLPSGSETTFKEAIINHVSRPAHYTTATTSGRSLGVGGGSHLGEDRTMALAETA 947
            .             :|:.||      |.:...|....:.|:....| .|.:.:|.|...|....|
Mosquito  1088 A-------------TGTTTT------NALPTTADCAASATAPEQAG-PGAARVGVDGGNANVPEA 1132

  Fly   948 GP--GPVVRVKLCLRSNHEHCGAYANAEIGKSYMPHKSSMTTSALVAIIIASLSFVVFLGLLYAF 1010
            |.  |.|.........:....|.|.|........|.|.:|.....:|   .||            
Mosquito  1133 GTAVGGVTGESSTAGGSQIEPGEYENLPFHGLQTPPKKAMLCKTNLA---PSL------------ 1182

  Fly  1011 CHCRRKHAAKKESSSVGGGVGGGNANATANPGSTGAKEYDL----------DLDASRRPSLSQDP 1065
                 ||                 .|.|..|.......|:.          .|.|...|:|    
Mosquito  1183 -----KH-----------------HNKTLTPSCFPTHPYNYINYQKDCQKGGLQAPLHPTL---- 1221

  Fly  1066 QQSQQQPPPP----PPYY---------PTGTLDSKD--------IGNGNGGMEL----------T 1099
            |.|....|||    ||..         ...:||:.|        || |...|:.          |
Mosquito  1222 QHSGLPAPPPSSGEPPSLDDSCKSAERKLASLDNSDTLSSHSFTIG-GTRSMKRSSEKKLIDLET 1285

  Fly  1100 LTALHDPDEQLNMQQQQHHSN--------------HGQYQQPKAI-LGIYGGVAGSGGNNSGGQH 1149
            :|.|:   |.|....|.|.:.              .|.:|:...| |...|...||..:||.   
Mosquito  1286 VTPLY---ENLTDSIQIHETTAPTPLVPPGKPLILEGPHQERYRISLKKPGRKGGSSRSNSA--- 1344

  Fly  1150 PHSNGYGYHVTSAIGVDSDSYQVLPSVANSAAGSHGHGSGHGHGLGA--GESG------PLEATP 1206
             .||.| |.....|...........:...|.|...|.|.|.||||.|  |..|      |:....
Mosquito  1345 -VSNSY-YDCIKPIPAPRHRKYASTNSLVSKAHPGGGGGGGGHGLKAYGGNGGSSSRLDPIYMNL 1407

  Fly  1207 PTCNISG-------------GSSSNSGI--NPMQQ--------QHSARANLTNQ----------- 1237
            |..|..|             ||..:.||  .|:.:        ||..|..:..:           
Mosquito  1408 PFGNKGGHESSLRLHSDTESGSEGHRGIADYPVPRDNHYLEITQHQTRIVIPRELFPVDSREQQA 1472

  Fly  1238 ---------------PTIATASSTNNYNNHLNNTNIAHTTNNTNNCTTLKRGHLGNRERERERCQ 1287
                           |.:....||.:     ..|..:.:|::||:...:|.....:.....:..|
Mosquito  1473 KINQLLRKSGAPPVPPALLATGSTPS-----TTTPSSSSTSSTNSRRHIKLPLQKHHSFNFQSSQ 1532

  Fly  1288 VTAATAATTTALATTITT-TSRNAKAATT---------TTTL-------AITGS-SSNSNENNYS 1334
            ...||.......:.:|:: |.|:.:.:::         |:||       ..||. ..|.:||.|.
Mosquito  1533 TVEATVRDLKIKSHSISSKTLRDYRGSSSGQRNGQSNGTSTLNHHHHHSHHTGMLHENDSENEYY 1597

  Fly  1335 NARDLSQEALWRLQMATAQSQQIYVERPPSAF---SGLVDYSGYSPHIPTVTSSL 1386
            :.:...|:.    |....|.||.:..|..|.|   :..|.:...:| :||.|:::
Mosquito  1598 DQQQQEQQH----QHQQQQQQQQHRHRAASHFPYDTSTVAFKPITP-VPTSTTAI 1647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fredNP_608812.3 Ig 132..228 CDD:472250 25/110 (23%)
Ig strand B 148..152 CDD:409353 1/8 (13%)
Ig strand C 162..166 CDD:409353 1/3 (33%)
Ig strand E 190..194 CDD:409353 1/3 (33%)
Ig strand F 204..209 CDD:409353 1/4 (25%)
Ig strand G 221..224 CDD:409353 0/2 (0%)
Ig 238..313 CDD:472250 23/87 (26%)
Ig strand B 250..254 CDD:409353 0/3 (0%)
Ig strand C 264..268 CDD:409353 1/3 (33%)
Ig strand E 278..282 CDD:409353 2/6 (33%)
Ig strand F 292..297 CDD:409353 3/4 (75%)
Ig strand G 306..309 CDD:409353 0/2 (0%)
Ig_3 316..385 CDD:464046 22/95 (23%)
Ig_2 416..501 CDD:464026 22/85 (26%)
Ig 523..614 CDD:472250 28/97 (29%)
Ig strand B 524..528 CDD:409568 0/3 (0%)
Ig strand C 537..541 CDD:409568 1/3 (33%)
Ig strand E 566..570 CDD:409568 0/3 (0%)
Ig strand F 594..599 CDD:409568 2/4 (50%)
Ig strand G 607..610 CDD:409568 1/2 (50%)
Ig_3 618..703 CDD:464046 20/95 (21%)
FN3 720..838 CDD:238020 34/197 (17%)
LOC1280362XP_061509780.1 None

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