DRSC/TRiP Functional Genomics Resources

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Protein Alignment fred and LOC1272555

DIOPT Version :10

Sequence 1:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster
Sequence 2:XP_061512385.1 Gene:LOC1272555 / 1272555 VectorBaseID:AGAMI1_000296 Length:1387 Species:Anopheles gambiae


Alignment Length:1508 Identity:318/1508 - (21%)
Similarity:507/1508 - (33%) Gaps:482/1508 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LDTREGVDLVLKCRFTEHYDSTDFTFYWARWTCCPTLFENVAIGDVQLNSNY-RLDFRPSR--GI 86
            |...||.:.:|:|   |.|:....    .:||     .:..|:|.......| |......|  ||
Mosquito    36 LQVLEGTEALLRC---EIYNLVGA----VQWT-----KDGFALGFSHTIPGYPRYSVLADRNLGI 88

  Fly    87 YDLQIKNTSYNRDNGRFECRIKAKGTGADVHQEFYNLTVLTAPHPPMVT--PGNLAVATEE-KPL 148
            |:|:|.|.|. .|:..::|::......:.:... ..|||::.|....:.  ..|..|...| :.|
Mosquito    89 YNLRISNASI-EDDAEYQCQVGPAKFNSAIRAN-ARLTVISPPSSIEIQGHSRNAKVEVREGQDL 151

  Fly   149 ELTCSSIGGSPDPMITWYR---EGSTVPLQSYALKGGSKNHYTNATLQIVPRRADDGAKYKCVVW 210
            .|||......|...|.|||   |..:..:::...:...|.:..::.|:|.|...||..:|.|...
Mosquito   152 TLTCVVSNAKPVAQIVWYRGKTEYKSDTIENKVTETEGKRYTVSSQLRIKPTSDDDYMEYTCQAK 216

  Fly   211 NRAMPEGHMLETSVTLNVNY---YPRVEVGPQNPLKVERDHVAKLDCRVDAKPMVSNVRWSRNGQ 272
            ::|:.....::|.|.|:|.|   .|::| |......:.|....:|.||.......:.:.|.:|..
Mosquito   217 HKALQPDRPMQTKVQLSVLYPPGEPQIE-GFTAGEVLRRGQNVELICRSRGGNPPAQLIWYKNDV 280

  Fly   273 YVSATPTHTIYR-VNRHHAGKYTCSADNGLGKTG--------------EKDIVLDVLYPPIVFIE 322
            .|     ...|| .:|.....|:..|:.|..|..              :.:|.|.||:.|.....
Mosquito   281 QV-----RMAYRTTDRLSENIYSFVAEEGDNKARLRCEANNIMIAAPLKTEITLSVLFAPTQVTI 340

  Fly   323 SKTHEAEEGETVLIRCNVTANPSPINVEWLKEG------------APDFRYTGELLTLGSVRAEH 375
            |...||..|:.|.::|....:..|..::|...|            .||    |..:||.::....
Mosquito   341 SGASEARTGDVVSLQCQTAPSNPPAEIKWSVSGHHVKNTTSRTIENPD----GGWITLSNISVPV 401

  Fly   376 AGN-----YICRSVNIM------------------QPFSSKRVEG---------------VGNST 402
            ..|     .||..:|:.                  ||..:...||               .|.:.
Mosquito   402 EANKRSLVVICHGLNMQLTENVIATHTVNVLLPPSQPVITGYTEGTIIAAGSVQRLQCTSTGGNP 466

  Fly   403 VALLVRHRPGQAYITPNK----------------------------------------------- 420
            :|.|..::..:...||.|                                               
Mosquito   467 LATLTWYKNDKKLNTPTKTTDKSVSSEISILVNATDNQAKYRCEAHNSATEIPMSASRTLAVNFP 531

  Fly   421 ----------PVVHVGNGVTLTC---SANPPGWPVPQYRWFR----------------------- 449
                      |.:..|...||.|   |:|||.    ...|:|                       
Mosquito   532 PETVKIKIIPPELKPGIEATLICDSSSSNPPA----TISWWRDGIAVDGMNNSSKPGLWGGTVSS 592

  Fly   450 ---------DMDGDI-------------------------------------------------- 455
                     ||||::                                                  
Mosquito   593 LELKVNISQDMDGNVYTCQSANEALQRNVHEAIKLQVLYPPKFKPPPSSTVVGAEGEPLTVAMVA 657

  Fly   456 -GN--------------------TQKILAQGPQYSIPKAHLGSEGKYHCHAVNELGIGKI-ATII 498
             ||                    .|:|:::||..:|.:.:....|.|.|.|||..|...| .:::
Mosquito   658 TGNPMSISYTWTKDGLPILSSAGAQRIVSEGPILNITRLNRNDTGIYTCEAVNSQGSAMINISVV 722

  Fly   499 LEVHQPPQFLAKLQQHMTRRVGDVDYAVTCSAKGKPTPQ--IRWIKDGTEILPTRKMFDIRTTPT 561
            :|.....|   .:.:::|...|: :..::|:.:|||..:  |||.:.|.::       .|:|:.|
Mosquito   723 VEYGASIQ---SISENVTVNPGE-EAMLSCTVEGKPLTEEHIRWERIGYDM-------TIKTSTT 776

  Fly   562 DAGGGVVAVQSILRFRGKARPNGNQLLPNDRGLYTCLYENDVNSANSSMHL-------RIEHEPI 619
            .|.|     .|.|..:...|        .|.|.:.|:.:|.|.:..|...|       .|:..|:
Mosquito   777 FANG-----TSYLHVKNARR--------EDVGNFRCIADNRVANPTSRDVLLIVKFAPEIDKSPV 828

  Fly   620 VIHQYNKVAYDLRESAEVVCRVQAYPKPEFQWQYGNNPSPLTMSSDGHYEISTRMENNDVYTSIL 684
            ::    :.|....|.|.:.||.||.|:|:|.|  ..:...|.::....:.:..:..:...|.|||
Mosquito   829 ML----RAAAGFGERARLPCRAQAAPRPKFYW--SRSGQVLNVNQSAKFYVEHKQIDALTYESIL 887

  Fly   685 RIAHLQHSDYGEYICRAVNPLDSIRAPIRLQPKGSPEKPTNLKILEVGHNYAVLNWTPGFNGGFM 749
            .:..:..:|||.|.|.|.|.|.:::..:||.....|:.|.:|.:|.|.|:...|.|||||:|| |
Mosquito   888 VVERVASNDYGLYECIARNELGNVKEKVRLDVTSPPDPPVSLNVLNVTHDSVTLAWTPGFDGG-M 951

  Fly   750 STKYLVSYRRVATPREQTLSDCSGNGYIPSYQISSSSSNSNHEWIEFNCFKENPCKL--APLDQH 812
            ...|.:.||.:                           ||:..|.|.:  :.|..||  ..|..:
Mosquito   952 KANYRIRYREL---------------------------NSDRYWYEDS--QPNSYKLTIGGLRMN 987

  Fly   813 QSYMFKVYALNSKGTSGYSNEILATTKVSKIPPPLHVSYDPNSH----------------VLGIN 861
            ..|:|.:.|.|..|:|.|..::  |...:|..||...:....|.                ||.|.
Mosquito   988 TLYVFSIMASNGLGSSRYLPDV--TRAHTKDTPPSQPASSLGSKTATSQSTGGTIGASGIVLLIG 1050

  Fly   862 VAA-TCLSL--IAVVESLVTRDATVPMWEIVETLTLLPSGSETTFKEAIINHVSRPAHYTTATTS 923
            ||| .||.|  |.::...:.|.......:..|||:.:...|:....:|     :|| .||..|||
Mosquito  1051 VAAGICLVLLNIILIGCCIHRRTVHKRIKRGETLSSVSEKSDAYSTDA-----NRP-DYTDDTTS 1109

  Fly   924 GRSLGVGGGSHLGEDRTMALAETAGPGPVVRVKLCLRSNHEHC-GAYANAEIGKSYMPHKSSMTT 987
                 ....::|.|:..|       |.|..:.:..|.....:. ||||..      :||......
Mosquito  1110 -----KSASTYLVENGDM-------PPPRYQKEGTLPPYPNNINGAYART------LPHPRHNPV 1156

  Fly   988 SALVAIIIASLSFVVFLGLLYAFCHCRRKHAAK--KESSSVGGGVGGGNANATANPGST-GAKEY 1049
            :                       :.:|.|..:  :.||.|          ...:||.. ....|
Mosquito  1157 N-----------------------YQQRSHDDQMIERSSYV----------TAPSPGPPFDGSYY 1188

  Fly  1050 DLDLDA-SRRPSLSQDPQQSQQQPPPPP--PYYP--TGTLDSKDIGNGNGGMELTLTA---LHDP 1106
            :::.|. ...|.:.||....:...||||  |..|  |||              ||.|:   :..|
Mosquito  1189 NMNSDRYLSYPPMQQDYSAMEMSTPPPPVIPALPKNTGT--------------LTRTSRPMVPPP 1239

  Fly  1107 DEQLNMQ--------QQQHHSNH------GQYQ----QPKAILGIYGGVAGSGGNNSGGQHPHSN 1153
            |...:.|        ..||.|::      |..|    .||.:.||......:...::..||....
Mosquito  1240 DVTYHAQSVVNESSSSPQHMSSNLSNTVLGPSQAPVPAPKPLQGILKDPKRNSSASNSSQHQQLQ 1304

  Fly  1154 GYGYHVTSAIGVDSDS-------YQVLPSVANSAAGSHGHGSGHGHGLGAGES-------GPLEA 1204
                |....|.|.:.|       ...||.|.::..|:...|:|...|.|...|       |..: 
Mosquito  1305 ----HGAQLIAVQNPSPVPLVGGVPGLPLVGSTFLGAAVAGNGPNGGTGGTSSLGNSLLIGTYD- 1364

  Fly  1205 TPPTCNISGGSSS 1217
             |.:.|:|..::|
Mosquito  1365 -PSSTNLSSFNAS 1376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fredNP_608812.3 Ig 132..228 CDD:472250 25/101 (25%)
Ig strand B 148..152 CDD:409353 2/3 (67%)
Ig strand C 162..166 CDD:409353 1/3 (33%)
Ig strand E 190..194 CDD:409353 1/3 (33%)
Ig strand F 204..209 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 1/2 (50%)
Ig 238..313 CDD:472250 16/89 (18%)
Ig strand B 250..254 CDD:409353 1/3 (33%)
Ig strand C 264..268 CDD:409353 0/3 (0%)
Ig strand E 278..282 CDD:409353 0/3 (0%)
Ig strand F 292..297 CDD:409353 1/4 (25%)
Ig strand G 306..309 CDD:409353 0/2 (0%)
Ig_3 316..385 CDD:464046 18/85 (21%)
Ig_2 416..501 CDD:464026 33/248 (13%)
Ig 523..614 CDD:472250 23/99 (23%)
Ig strand B 524..528 CDD:409568 0/3 (0%)
Ig strand C 537..541 CDD:409568 2/5 (40%)
Ig strand E 566..570 CDD:409568 0/3 (0%)
Ig strand F 594..599 CDD:409568 1/4 (25%)
Ig strand G 607..610 CDD:409568 1/2 (50%)
Ig_3 618..703 CDD:464046 23/84 (27%)
FN3 720..838 CDD:238020 33/119 (28%)
LOC1272555XP_061512385.1 None

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