DRSC/TRiP Functional Genomics Resources

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Protein Alignment fred and Vsig10l2

DIOPT Version :10

Sequence 1:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster
Sequence 2:NP_001365224.1 Gene:Vsig10l2 / 115487164 MGIID:2685959 Length:792 Species:Mus musculus


Alignment Length:888 Identity:184/888 - (20%)
Similarity:321/888 - (36%) Gaps:220/888 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 PHPPMVTPGNLAVATE---EKPLELTCSSIGGSPDPM-ITW-YREGSTVPLQSYALKGGSKNHYT 188
            |:|...|.|..|::.:   ...:||.|.:   .|.|| :.| :....::.||..|:..|:.:...
Mouse    30 PYPTSNTAGEEALSVQGVRGSSVELECRT---GPAPMAVLWSFTPLGSLVLQPVAVTSGASSKVE 91

  Fly   189 NATL----------QIVPRRADDGAK--YKCVVWNRAMPEGHMLET-------SVTLNVNYYPRV 234
            :..|          .:|.....:||:  :.|   ...:..|..:.|       :|.:.|: .|||
Mouse    92 SGALALGVVSLRNSSLVIEELREGARGHFLC---QTLLVSGGQVHTAYLYLMLTVLVPVS-KPRV 152

  Fly   235 EVGPQNPLKVERDHVAKLDCRVDAKPMVSNVRWSRN-----GQYV--SATPTHTIYRVNRHHAGK 292
            ::...:|:: ....||....|...:|:..:  |..:     |:.:  .:.|...:..|||.|.|.
Mouse   153 QLNDPSPVE-GVSVVATCAVREGTEPLTFS--WHHHMPQGPGEVLVGLSEPRLQLDPVNRTHLGW 214

  Fly   293 YTCSADNGLGKTGEKDIVLDVLY---PPIVFIESKTHE-----AEEGETVLIRCNVTANPSPINV 349
            ||||..|.:.:.......|||:|   .|::.:|.....     |.|.|.|.:.|...:|| |.:.
Mouse   215 YTCSVSNVVNQLKSDGAFLDVIYGPDKPVITVEPLGFSEDGFWASEREEVTLSCLAASNP-PSHY 278

  Fly   350 EWLKEGAPDFRYTGELLTLGSVRAEHAGNYICRSVNIMQPFSSKRVEGVGNSTVALLVRHRP-GQ 413
            .|.::.:.  .:||....:.|....|.|.|.|.:.|       :.::....:||.|::.:.| ||
Mouse   279 VWFRDDSQ--IHTGPTYIIASASRTHTGLYTCLAHN-------RHLDTHTQTTVQLIIYYPPEGQ 334

  Fly   414 AYITPNKPVVHVGNGVTLTCSANPPGWPVPQYRWFRDMDGDIGNTQKILAQGPQYSIPKAHLGSE 478
                |:..|:.....|||.|:. |.|:|..|..|                :|||...|.|.....
Mouse   335 ----PSCAVLPTLGVVTLLCTW-PGGFPNAQLHW----------------EGPQGIGPSASGNVT 378

  Fly   479 GKYHCHAVNELGI----GKIATIILEVH------QPPQFLAKLQQHMTRRVGDVDYAVTCS-AKG 532
            ..|....:....|    |:..|:.:.:.      :||   .......|..|||....::|. ..|
Mouse   379 WSYTTTGLPNGSIFSCTGQHPTLAMPIFCRVTLWEPP---GSPTCWTTATVGDQYIMLSCEWPGG 440

  Fly   533 KPTPQIRWIKDGTEILPTRKMFDIRTTPTDAGGGVVAVQSILRFRGKARPNGNQLLPNDRGLYTC 597
            :|...:.|:             |.:.:..|.|..    |::...:.::...|.:        :||
Mouse   441 EPPAMLSWL-------------DRQQSLGDLGSS----QAVHLLQAQSDLAGRE--------FTC 480

  Fly   598 LYENDVNSANSSMHLRIEHEPIVIHQYNKVAYDLRESAEVVCRVQ--------AYPKPEFQWQYG 654
            ...:.:.:..|...||:|...:.:.: .:|:....|.|.:.|.:|        .:..|:.|...|
Mouse   481 QGSHPLTAPGSHCRLRLEVPQLTVAE-PRVSVLEGEEAWLGCALQRGTPPAQLLWLGPQQQQLEG 544

  Fly   655 NNPSPLTMSSDGHYEISTRMENNDVYTSILRIAHLQHSDYGEYICRAVNPLDSIRAPIRLQPKGS 719
            :.|..:......|..:..|..:.         ||.:    |.|.|.|.|.|.:....:.|:....
Mouse   545 STPGFILHPEGTHLRLQVRDADP---------AHHR----GTYQCVARNALGNSSQSVLLEVLRY 596

  Fly   720 PEKPTNLKILEVGH----NYAVLNWT---PGFNGGFMSTKYLVSYRRVATPREQTLSDCSGNGYI 777
            | .|.|:.|..:.:    ....|.|.   ||...||:      ..:|.:.|..:     :|...:
Mouse   597 P-TPPNVTISRLTYRRQRREVQLQWAIYGPGNLTGFL------VQQRASVPSSE-----AGAWEV 649

  Fly   778 PSYQISSSSSNSNHEWIEFNCFKENPCKLAPLDQHQSYMFKVYALNSKGTSGYSNEILATTKVSK 842
            .:..|...|.:.               :|..||....|.|::.|:|.. |:||.:|         
Mouse   650 AASDIEPESRDR---------------RLGGLDPGVLYAFRILAMNHH-TAGYPSE--------- 689

  Fly   843 IPPPLHVSYDPNSHVLGINVAATCLSLIAVVESLVT--------------RDATVPM-------- 885
            :..|:..::.....|||   ||....::|:..||:.              ....|||        
Mouse   690 VKTPVDPAFSAYPAVLG---AAGTGVVVALATSLLVFQYAARHPHTFPCLSRLLVPMEHEQQQRA 751

  Fly   886 -WEIVETLTLLPSGSE----TTFKEAIINHVSRPAHYTTATTS 923
             .|.:|.    |:|:|    |:..:.|...:..|.:.|...|:
Mouse   752 SRESIEA----PAGTETASTTSSSDPIQESIDAPVNVTITVTA 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fredNP_608812.3 Ig 132..228 CDD:472250 22/119 (18%)
Ig strand B 148..152 CDD:409353 2/3 (67%)
Ig strand C 162..166 CDD:409353 2/5 (40%)
Ig strand E 190..194 CDD:409353 1/13 (8%)
Ig strand F 204..209 CDD:409353 1/6 (17%)
Ig strand G 221..224 CDD:409353 1/9 (11%)
Ig 238..313 CDD:472250 19/81 (23%)
Ig strand B 250..254 CDD:409353 1/3 (33%)
Ig strand C 264..268 CDD:409353 0/3 (0%)
Ig strand E 278..282 CDD:409353 1/3 (33%)
Ig strand F 292..297 CDD:409353 3/4 (75%)
Ig strand G 306..309 CDD:409353 0/2 (0%)
Ig_3 316..385 CDD:464046 18/73 (25%)
Ig_2 416..501 CDD:464026 20/88 (23%)
Ig 523..614 CDD:472250 13/91 (14%)
Ig strand B 524..528 CDD:409568 0/3 (0%)
Ig strand C 537..541 CDD:409568 0/3 (0%)
Ig strand E 566..570 CDD:409568 0/3 (0%)
Ig strand F 594..599 CDD:409568 2/4 (50%)
Ig strand G 607..610 CDD:409568 1/2 (50%)
Ig_3 618..703 CDD:464046 17/92 (18%)
FN3 720..838 CDD:238020 26/124 (21%)
Vsig10l2NP_001365224.1 Ig_3 149..221 CDD:464046 20/74 (27%)
Ig_3 241..312 CDD:464046 18/73 (25%)
IG_like 507..593 CDD:214653 20/98 (20%)
Ig strand B 517..521 CDD:409353 1/3 (33%)
Ig strand C 531..535 CDD:409353 0/3 (0%)
FN3 <573..>711 CDD:442628 38/177 (21%)
Ig strand F 573..578 CDD:409353 2/4 (50%)
Ig strand G 586..589 CDD:409353 0/2 (0%)

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