DRSC/TRiP Functional Genomics Resources

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Protein Alignment fred and LOC103909416

DIOPT Version :9

Sequence 1:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster
Sequence 2:XP_021333716.1 Gene:LOC103909416 / 103909416 -ID:- Length:632 Species:Danio rerio


Alignment Length:611 Identity:118/611 - (19%)
Similarity:199/611 - (32%) Gaps:216/611 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 REGVDLVLKCRFTEHYDSTDFTFYWARWTCCPTLFENVAIGDVQLNSNYRLDFRPSRGIYDLQIK 92
            :||..:.|.|:.:..... :.||.|.|.|             .:||...|.:       ..|.::
Zfish    47 KEGDSVTLSCKSSCSLPE-ETTFIWYRNT-------------ERLNKGIRTE-------NQLHLQ 90

  Fly    93 NTSYNRDNGRFEC-------------------------------------------RIKAKGTGA 114
            :.|| .|.|.::|                                           :|....|.|
Zfish    91 SVSY-YDAGYYQCAVGGNEHLISPAVYVKVGSVYGLVDWGVSYSPSYVCALKGSTVKISCTSTHA 154

  Fly   115 DVH--QEFYNLTVLTAPHPP--------------------------------------------- 132
            |.|  :.......:|...||                                             
Zfish   155 DYHLMKSVSTKPAVTGEEPPDLCTDPDKRGGIQCVRDKDTLIITLTAVTEADKHIYYCRFTDKEN 219

  Fly   133 ---MVTPG------NLAVATEEKPLE-----LTCSSIGGSP-DPMITWYREGSTVPLQSYALKGG 182
               .|.||      :|.|.|::..:|     |:|.|....| :....|:|       ::..|.|.
Zfish   220 KRWTVIPGARLDVTDLQVETQQTVVEGGSVTLSCKSSCSLPEETTFIWFR-------KTERLTGE 277

  Fly   183 SKNHYTNATLQIVPRRADDGAKYKCVVWNRAMPEGHMLETSVTLNVNY-----YPRVEVGPQNPL 242
            :.|:..:  ||.|  ..:|..:|:|.    |....|:....|.|.|.:     |..|:..|.:..
Zfish   278 TLNNQLH--LQSV--TYNDAGEYRCA----AGGNEHLKSPPVFLKVGWINSLQYWGVKYSPSSVC 334

  Fly   243 KVERDHVAKLDCR---VDAKPMVSNVRWSRNGQYVSATP---------------------THTIY 283
            .::...|. :.|.   .|...:..:. |::..:....||                     :.|:.
Zfish   335 ALKGSTVT-MSCTPTYTDDYKLTPDF-WTKTSKTDGETPDLCTDPDKTGRVQCVRDKDTSSITLT 397

  Fly   284 RVNRHHAGKYTCSADNGLGKTGEKDIVLDVLYPPIVFIESKTHEAE------EGETVLIRCNVTA 342
            .|......||.||..:   |...:..|:     |.|:::.|..:.|      ||::|.:.|..:.
Zfish   398 AVTEADKHKYYCSCTD---KWNRRWTVV-----PGVWLDVKDLQVETQQTVVEGDSVTLSCKSSC 454

  Fly   343 N-PSPINVEWLKEGAPDFRYTGELLT----LGSVRAEHAGNYICRSVNIMQPFSSKRVEGVGNST 402
            : |......|.:...   |.|||.|.    |.||....||.|.|         :::..|.:.:..
Zfish   455 SLPEETTFIWYRNTE---RLTGETLNNQLQLQSVSRSDAGEYRC---------AARGNEHLKSPP 507

  Fly   403 VALLVRHRPGQAYITPNKPVVHV-GNGVTLTCS--ANPPGWPVPQYRWFRDMDGDIGNTQKILAQ 464
            |.|.|.::|....::.:...|.| |:.|||:||  :||   |...:.||::     |.:..: ..
Zfish   508 VHLSVEYKPNSVSVSVSGSAVIVSGDSVTLSCSSDSNP---PAVNFTWFKE-----GQSSAV-GS 563

  Fly   465 GPQYSIPKAHLGSEGKYHCHAVNELG 490
            |..::|...:.....:|:|.|.|:.|
Zfish   564 GQSFNISSFNSSDSDRYYCEAENKYG 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fredNP_608812.3 Ig 29..126 CDD:299845 23/141 (16%)
IG_like 141..228 CDD:214653 22/92 (24%)
Ig 147..228 CDD:299845 20/86 (23%)
I-set 232..313 CDD:254352 16/104 (15%)
IGc2 250..302 CDD:197706 11/75 (15%)
IG_like 323..385 CDD:214653 20/72 (28%)
IGc2 330..385 CDD:197706 18/59 (31%)
Ig_2 416..501 CDD:290606 21/78 (27%)
IG_like 418..501 CDD:214653 21/76 (28%)
I-set 505..612 CDD:254352
Ig 526..611 CDD:143165
IG_like 633..715 CDD:214653
Ig 635..713 CDD:143165
FN3 720..838 CDD:238020
LOC103909416XP_021333716.1 IG_like 43..119 CDD:214653 18/93 (19%)
IG_like 240..315 CDD:214653 20/89 (22%)
IG 330..429 CDD:214652 17/108 (16%)
IG_like 437..512 CDD:214653 21/86 (24%)
Ig_2 532..599 CDD:316418 19/67 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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