DRSC/TRiP Functional Genomics Resources

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Protein Alignment fred and si:ch211-286b5.9

DIOPT Version :9

Sequence 1:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster
Sequence 2:XP_017211393.1 Gene:si:ch211-286b5.9 / 100003869 ZFINID:ZDB-GENE-121214-63 Length:347 Species:Danio rerio


Alignment Length:283 Identity:73/283 - (25%)
Similarity:115/283 - (40%) Gaps:60/283 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 SVTL--NVNYYPRVEVGPQNPLKVERDHVAKLDCRVDAKPMVSNVRWSRNGQYVSATPTHTIYRV 285
            |:.|  |.||..|||.     ...::....||          ||||....|.|.....|..  ..
Zfish    66 SINLLDNSNYTGRVEY-----FDKDKFFFVKL----------SNVRQEDEGMYCLRIETKV--EK 113

  Fly   286 NRHHAGKYTCSADNGLGKTGEKDIVLDVLYPPIVFIESKTHEAEEGETVLIRCNVTANPSPINVE 350
            .||            ||..|.:..|.::.      :|: ..|..||::.::.|..:.|....|..
Zfish   114 ERH------------LGYPGIELTVTELR------VET-PEEVVEGDSPVLICKSSCNLGSTNFS 159

  Fly   351 WLKEGAPDFRYTGE-LLTLGSVRAEHAGNYICRSVNIMQPFSSKRVEGVGNSTVALLVRHRPGQA 414
            |.|.|....::.|| .|.|.||..|.:|||.|         :.:.::.:.:..:.|.||:.|...
Zfish   160 WYKNGESFSKWVGENQLILQSVSREDSGNYSC---------AVRDLKDLPSPALTLNVRYPPKSV 215

  Fly   415 YITPNKPVVHV-GNGVTLTCS--ANPPGWPVPQYRWFRDMDGDIGNTQKILAQGPQYSIPKAHLG 476
            .::.:...|.| |:.|||:||  :|||..   .:.||::      |....:..|..:||...:..
Zfish   216 SVSVSGSAVIVSGDSVTLSCSSDSNPPAL---NFSWFKE------NQSSAIGSGQSFSISSFNTN 271

  Fly   477 SEGKYHCHAVNELGIGKIATIIL 499
            ..|:|:|.|.|:.|..:.|::.|
Zfish   272 HSGRYYCEAHNKYGSLRSASVSL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fredNP_608812.3 Ig 29..126 CDD:299845
IG_like 141..228 CDD:214653 2/6 (33%)
Ig 147..228 CDD:299845 2/6 (33%)
I-set 232..313 CDD:254352 18/80 (23%)
IGc2 250..302 CDD:197706 11/51 (22%)
IG_like 323..385 CDD:214653 20/62 (32%)
IGc2 330..385 CDD:197706 19/55 (35%)
Ig_2 416..501 CDD:290606 25/87 (29%)
IG_like 418..501 CDD:214653 25/85 (29%)
I-set 505..612 CDD:254352
Ig 526..611 CDD:143165
IG_like 633..715 CDD:214653
Ig 635..713 CDD:143165
FN3 720..838 CDD:238020
si:ch211-286b5.9XP_017211393.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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