DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and FH8

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_177171.1 Gene:FH8 / 843350 AraportID:AT1G70140 Length:760 Species:Arabidopsis thaliana


Alignment Length:591 Identity:142/591 - (24%)
Similarity:216/591 - (36%) Gaps:159/591 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   763 GQSSTKVSDNESAKEDGEKPHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPP 827
            |:|||.              |:|.......|||    ......|.||||||.......||.|.||
plant   211 GRSSTS--------------HSVIHNEDHQPPP----QVKQSEPTPPPPPPSIAVKQSAPTPSPP 257

  Fly   828 PPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPAPLPDPAEGNWFHRTNTMRKSAVN 892
            ||...||:|.||||.|::..|.       :|:|.||      |.|.|..|.....|:...|    
plant   258 PPIKKGSSPSPPPPPPVKKVGA-------LSSSASK------PPPAPVRGASGGETSKQVK---- 305

  Fly   893 PPKPMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDEPPAANGADAPPTAPPATKEIWTE 957
                ::||:|.::                         :||...:.               :|.:
plant   306 ----LKPLHWDKV-------------------------NPDSDHSM---------------VWDK 326

  Fly   958 IEETPLDNIDEFTE-LFSRQAIAPVSKPKELKVKRAKS--IKVLDPERSRNVGIIWRSLHVPSSE 1019
            |:........:..| ||...|:...| |::...|..||  |.:|||.:|:|..|:.:||.:...|
plant   327 IDRGSFSFDGDLMEALFGYVAVGKKS-PEQGDEKNPKSTQIFILDPRKSQNTAIVLKSLGMTREE 390

  Fly  1020 IEHAIYHIDTSVVSLEALQHMSNIQATEDELQRIKEAAGGDIPLDHPEQFLLD-ISLISMASERI 1083
            :..::  |:.:....:.|:.::.|..|::|...|.|..|....|...|.||.. :..:..|..|:
plant   391 LVESL--IEGNDFVPDTLERLARIAPTKEEQSAILEFDGDTAKLADAETFLFHLLKSVPTAFTRL 453

  Fly  1084 SCIVFQAEFEESVTLLFRKLETVSQLSQQLIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNL 1148
            :..:|:|.:...:....:.|:|:....::|........:...||..||.||.|. .||.|..|||
plant   454 NAFLFRANYYPEMAHHSKCLQTLDLACKELRSRGLFVKLLEAILKAGNRMNAGT-ARGNAQAFNL 517

  Fly  1149 DILGKLKDVKSKESHTTLLHFIVRTYIAQRRKEGV-----HP----------------------- 1185
            ..|.||.||||.:..|:||:|:|...:....|..|     |.                       
plant   518 TALLKLSDVKSVDGKTSLLNFVVEEVVRSEGKRCVMNRRSHSLTRSGSSNYNGGNSSLQVMSKEE 582

  Fly  1186 -----LEIRLPI-----PEPADVERAAQMDFEEVQQQIFDLNKK--------------------- 1219
                 |::.||:     .|.::|::||.:|:|.|......|..:                     
plant   583 QEKEYLKLGLPVVGGLSSEFSNVKKAACVDYETVVATCSALAVRAKDAKTVIGECEDGEGGRFVK 647

  Fly  1220 ----FLGCKRTTAKVLAASRPEIMEPFKSKMEEFVEGA-DKSMAKLHQSLDECRDLFLETMRFYH 1279
                ||.......|:......::||..|...:.:..|| .|....||        ||:....|..
plant   648 TMMTFLDSVEEEVKIAKGEERKVMELVKRTTDYYQAGAVTKGKNPLH--------LFVIVRDFLA 704

  Fly  1280 FSPKAC 1285
            ...|.|
plant   705 MVDKVC 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 101/466 (22%)
FH8NP_177171.1 FH2 297..714 CDD:214697 102/474 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.770

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