DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and FH6

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_201548.1 Gene:FH6 / 836883 AraportID:AT5G67470 Length:899 Species:Arabidopsis thaliana


Alignment Length:1132 Identity:234/1132 - (20%)
Similarity:386/1132 - (34%) Gaps:407/1132 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 FNVSKAKKVELQNL-SSRFTAAVTQTPPGVTSSTPNESGVTGPAGPLGATTSSPSLETQSTVIIS 408
            |:||.:.:...:.| ...|..:.|..||...|:         |:.||..|...|...        
plant    18 FSVSVSSEAHRRILHQPLFPESSTPPPPDFQST---------PSPPLPDTPDQPFFP-------- 65

  Fly   409 FKSSQTPVQSQTNSAASENVEDDTAPLPLPPPPP-------GFGTPTTPLLSSNVLKKVA----- 461
             ::..||.|:                |..|||||       |...||....|:...||||     
plant    66 -ENPSTPQQT----------------LFPPPPPPVSADVNGGLPIPTATTQSAKPGKKVAIVISV 113

  Fly   462 -----------SFTVEKSSAGNNSSNPPNLCPTSDETTLLATPCSSSLTVATLPPEIAVGAAAGG 515
                       :|.:.:..|.:.|           :|..|.|                     ||
plant   114 GIVTLGMLSALAFFLYRHKAKHAS-----------DTQKLVT---------------------GG 146

  Fly   516 VAGGAGSRRGSSYVPEKLSFAAYEKFEGQMLIKWLISTMQSNPKSSSGDANQELFNTLALQFCNN 580
            ..|| ||||             :::..|.             |.::|                :.
plant   147 GDGG-GSRR-------------FQEDSGP-------------PTTTS----------------ST 168

  Fly   581 LKYVGVLK--QISNEHLDCG------FSPY---------EMYQWTHTEQPTTSLPLTPGKLD-KV 627
            ..|:|.::  ::|....:.|      .|||         |.|:.:...||...|...|...| ..
plant   169 FLYMGTVEPTRVSASESNGGTNGPVNSSPYRKLNSAKRSERYRPSPELQPLPPLAKPPQPSDNSP 233

  Fly   628 AAWPFSSTPSGIRALESASLASLGAG-------------GVAGSL---------ATIATASTASS 670
            :|...||:.||....::|.....|:.             ...|||         :...:|.|.::
plant   234 SALSPSSSSSGEECRDTAFYTPHGSAISSDDGYYTAFPRSANGSLPHSKRTSPRSKFGSAPTTAA 298

  Fly   671 DNQKTLQQILKKRLLNCTTLAEVHAVVNELLSSVDEPPRRPSKRCVNLTELLNASEATVYEYNKT 735
            .....::.::            :.::..:|...|..||.|                         
plant   299 SRSPEMKHVI------------IPSIKQKLPPPVQPPPLR------------------------- 326

  Fly   736 GAEGCVKSFTDAETQTESEDCEGTCKCGQSSTKVSDNESAKEDGEKPHAVAPPPPPPPPPLHAFV 800
            |.|                               ||.:.......||....|||||......|..
plant   327 GLE-------------------------------SDEQELPYSQNKPKFSQPPPPPNRAAFQAIT 360

  Fly   801 APPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPP------------------------- 840
            ....|.|||...||||.   .|||||||||   .||||||                         
plant   361 QEKSPVPPPRRSPPPLQ---TPPPPPPPPP---LAPPPPPQKRPRDFQMLRKVTNSEATTNSTTS 419

  Fly   841 PAPIEGGGGIPPPPPPMSASPSKTTISPAPLPDPAEGNWFHRTNTMRKSAVNPPKP-MRPLYWTR 904
            |:..:   ....|.|...|.....::|...|....:|:            .:|.|| ::||:|.:
plant   420 PSRKQ---AFKTPSPKTKAVEEVNSVSAGSLEKSGDGD------------TDPSKPKLKPLHWDK 469

  Fly   905 IVTSAPPAP-----RPPSVANSTDSTE-----NSGSS-PDEPPAANGADAPPTAPPATKEIWTEI 958
            :..|:..|.     :..|...:.|..|     ||||| |.||                       
plant   470 VRASSDRATVWDQLKSSSFQLNEDRMEHLFGCNSGSSAPKEP----------------------- 511

  Fly   959 EETPLDNIDEFTELFSRQAIAPVSKPKELKVKRAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHA 1023
                           .|:::.|:::.:.         :||||::|:|:.|:.|:|:|...|:..|
plant   512 ---------------VRRSVIPLAENEN---------RVLDPKKSQNIAILLRALNVTREEVSEA 552

  Fly  1024 IYHIDTSVVSLEALQHMSNIQATEDELQRIKEAAGGDIPLDHPEQFLLDISLISMASERISCIVF 1088
            :...:...:..|.|:.:..:..|::|..:::|.:|....|...|:||..|..|..|.:|:..:::
plant   553 LTDGNPESLGAELLETLVKMAPTKEEEIKLREYSGDVSKLGTAERFLKTILDIPFAFKRVEAMLY 617

  Fly  1089 QAEFEESVTLLFRKLETVSQLSQQLIESE-DLKLVFSIILTLGNYMNGGNRQRGQADGFNLDILG 1152
            :|.|:..|..|....:|:.:.|.:|..|. .|||:.::::| ||.||.|. .||.|..|.||.|.
plant   618 RANFDAEVKYLRNSFQTLEEASLELKASRLFLKLLEAVLMT-GNRMNVGT-NRGDAIAFKLDTLL 680

  Fly  1153 KLKDVKSKESHTTLLHFIVRTYIAQR------------------RKEGVHPLEIRLPIP-EPADV 1198
            ||.|:|..:..||||||:|:......                  ||:|   |::...:. :..:|
plant   681 KLVDIKGVDGKTTLLHFVVQEITRSEGTTTTKDETILHGNNDGFRKQG---LQVVAGLSRDLVNV 742

  Fly  1199 ERAAQMDFEEVQQQI------FDLNKKFLGCKRTTAKVLAASRPEIMEPFKSKMEEFVEGADKSM 1257
            :::|.|||:.:...:      .|..:.||..:.|..:            |...|:.|::.|::.:
plant   743 KKSAGMDFDVLSSYVTKLEMGLDKLRSFLKTETTQGR------------FFDSMKTFLKEAEEEI 795

  Fly  1258 AKLHQSLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTNFTNDFKDIWKKEITSLLNE 1322
            .|:.....:...:..|...::|.:     ....:..|.:.|            :..::...:|:.
plant   796 RKIKGGERKALSMVKEVTEYFHGN-----AAREEAHPLRIF------------MVVRDFLGVLDN 843

  Fly  1323 LMKKSKQAQIESRRNVSTKVEKSGRIS 1349
            :.|:.|..| |...::.:...:|.|||
plant   844 VCKEVKTMQ-EMSTSMGSASARSFRIS 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 104/464 (22%)
FH6NP_201548.1 FH2 452..842 CDD:280362 105/482 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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