DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and Fh5

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_200276.1 Gene:Fh5 / 835554 AraportID:AT5G54650 Length:900 Species:Arabidopsis thaliana


Alignment Length:947 Identity:209/947 - (22%)
Similarity:332/947 - (35%) Gaps:313/947 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 GGVAGGAGSRRGSSYVPEKLSFAAYEKFEGQMLIKWLISTMQSNPKS-----------SSGDANQ 567
            |.:.||.|.:..|..|...:.|:..           |:.|::.||:.           |:|..|:
plant     3 GMIRGGMGDQNWSRLVFWLILFSGL-----------LVITLEENPEKDEIFLSQFMAPSTGQVNE 56

  Fly   568 ELFNTLALQFC-------------NNLKYVGV-------------LKQISNEHLDC--------G 598
            .:..|...|.|             .||.:.|.             |||..   |||        |
plant    57 HMEETSWAQRCWQDSDCVKEAVAEFNLCFPGSKDSRELFGLNHTNLKQTL---LDCIQEKGKLNG 118

  Fly   599 FSP-YEMYQWTHTEQPTTSLPLTPGKL--------------------------DKVAAWPFSSTP 636
            .:| |.....:..:.|..:|...||..                          .:.:::|.|.:|
plant   119 HNPKYLELLSSMLDIPRRNLATKPGSSPSPSPSRPPKRSRGPPRPPTRPKSPPPRKSSFPPSRSP 183

  Fly   637 SGIRALESASLASLGAGGVAGSLATIATASTA--SSDNQKTLQQILKKRLLNCTTLAEVHAVVNE 699
            ....|.::||..|           |.|..|.|  ..|::||:           .....|.||...
plant   184 PPPPAKKNASKNS-----------TSAPVSPAKKKEDHEKTI-----------IIAVVVTAVSTF 226

  Fly   700 LLSSV------------------DEPPRRPSKRCVNLTELLNASEATVYEYNKTGAEGCVK---- 742
            ||:::                  ||.|            ||:.|.:.....:.....|.||    
plant   227 LLAALFFLCCSRVCGNGSGGRKNDERP------------LLSLSSSDYSVGSSINYGGSVKGDKQ 279

  Fly   743 ---SFTDAETQTESEDCEGTCKCGQSSTKVSDNESAKEDGEKPHAVAP---PPPPPPPPLHAFV- 800
               ||.....|.:....:|:    .|.|..|..|....:|.:.:::..   ||..|||...|.| 
plant   280 GHQSFNIYSNQGKMSSFDGS----NSDTSDSLEERLSHEGLRNNSITNHGLPPLKPPPGRTASVL 340

  Fly   801 -----------APPPPP------------PPPPPPPPPLANYGAP--PPPPPPPPGSGSAPPPPP 840
                       .||.||            ||||.|.|.:.:...|  ||||.||||||...||||
plant   341 SGKSFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAGPPRPPPPAPPPGSGGPKPPPP 405

  Fly   841 PAPIEGGGGIPPPPPPMSASPSKTTISPAPLPDPAEGNWFHRTNTMRKSAVNPPKPMRPLYWTRI 905
            |.| :|    |.||||||..|.    :|.|...||:        .:...|  |...::|.:|.::
plant   406 PGP-KG----PRPPPPMSLGPK----APRPPSGPAD--------ALDDDA--PKTKLKPFFWDKV 451

  Fly   906 VTSAPPAPRPPSVANSTDSTENSGSSPDEPPAANGADAPPTAPPATKEIWTEIEETPLDNIDEFT 970
                                                    .|.|....:|.:|........:|..
plant   452 ----------------------------------------QANPEHSMVWNDIRSGSFQFNEEMI 476

  Fly   971 ELFSRQAIAPVSKPKELKVKRAKS--------IKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHI 1027
            |.....|.|..:|    ..|:..|        :::|:|::.:|:.|:.|:|:..:.|:..|:.  
plant   477 ESLFGYAAADKNK----NDKKGSSGQAALPQFVQILEPKKGQNLSILLRALNATTEEVCDALR-- 535

  Fly  1028 DTSVVSLEALQHMSNIQATEDELQRIKEAAGGDIPLDHPEQFLLDISLISMASERISCIVFQAEF 1092
            :.:.:.:|.:|.:..:..|.:|..:::...|....|...|:||..:..|..|.:|:..::|....
plant   536 EGNELPVEFIQTLLKMAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTL 600

  Fly  1093 EESVTLL---FRKLETV------SQLSQQLIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNL 1148
            .|.:..:   |:|||..      |:|..:|:|:         :|..||.||.|. .||.|..|.|
plant   601 HEEMAFVKESFQKLEVACKELRGSRLFLKLLEA---------VLKTGNRMNDGT-FRGGAQAFKL 655

  Fly  1149 DILGKLKDVKSKESHTTLLHFIVRTYIAQRRKEGVHPLE-IR------------LPIPEPAD--- 1197
            |.|.||.|||..:..||||||:|:..|   |.|||.... ||            |.:.|.::   
plant   656 DTLLKLADVKGTDGKTTLLHFVVQEII---RTEGVRAARTIRESQSFSSVKTEDLLVEETSEESE 717

  Fly  1198 --------------------VERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVLAASRPEIMEPF 1242
                                |:::|.:|.:.:...:..:.......:......:.:|..|  ..|
plant   718 ENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKARDFVNSEMKSSGEE--SGF 780

  Fly  1243 KSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYH 1279
            :..:|:|::.|:.|:..:.:.......|...|..::|
plant   781 REALEDFIQNAEGSIMSILEEEKRIMALVKSTGDYFH 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 92/445 (21%)
Fh5NP_200276.1 FH2 435..840 CDD:280362 92/446 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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