DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and FH19

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_196395.1 Gene:FH19 / 830671 AraportID:AT5G07780 Length:464 Species:Arabidopsis thaliana


Alignment Length:540 Identity:128/540 - (23%)
Similarity:224/540 - (41%) Gaps:100/540 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   808 PPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPAPLP 872
            |.|||||||....||.|||||||......|||||.|:......||||||             |||
plant    14 PLPPPPPPLMRRRAPLPPPPPPPLMRRRAPPPPPPPLMRRRAPPPPPPP-------------PLP 65

  Fly   873 DPAEGNWFHRTNTMRKSAVNPPK---PMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDE 934
            .|..               .|||   .::||:|.:...:.     |.|:.:.....:......||
plant    66 RPCS---------------RPPKTKCSLKPLHWVKKTRAL-----PGSLWDELQRRQECRDIEDE 110

  Fly   935 PPAANGADAPPTAPPATKEIWTEIEETPLDNIDEFTELFSRQAIAPVSKPKELKVKRAKSIKVLD 999
                              :|...||.    ::.|...:||..| .|..||:..||      .::|
plant   111 ------------------QILCAIEL----SVSEIETIFSLGA-KPKPKPEPEKV------PLID 146

  Fly  1000 PERSRNVGIIWRSLHVPSSEIEHAIYHIDTS-VVSLEALQHMSNIQATEDELQRIKEAAGGDIPL 1063
            ..|:.|..|....|::...::..|...:|.| :...:.::::.|:..|:::::.:....|.....
plant   147 LRRATNTEIRLMLLNIRLPDMIAAAMAMDESRLDDFDQIENLINLFPTKEDMKFLLTYTGDKGNC 211

  Fly  1064 DHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQLIESEDLKLVFSIILT 1128
            :...|:|.::..:.....::....|:.:|...:|.|.:.|..|:...:::..|:.||.:...||.
plant   212 EQLFQYLQEVVKVPRVESKLRVFSFKIQFGTQITKLTKGLNAVNSACEEIRTSQKLKDIMENILC 276

  Fly  1129 LGNYMNGGNRQRGQADGFNLDILGKLKDVKSKESHTTLLHFIVRTYIAQRRKE--GVH-PLEIRL 1190
            |||.:|.|. .||:|.||.||.|..|.:.::..|..||:|::.:. :|.:..:  ..| .||   
plant   277 LGNILNQGT-GRGRAVGFRLDSLLILSETRADNSKMTLMHYLCKV-LASKASDLLDFHKDLE--- 336

  Fly  1191 PIPEPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVLAASRPE--IMEPFKSKMEEFVEGA 1253
                  .:|.|:::..:.:.::|..:.|.....|:.    |.||..:  :.:.|:..::||:..|
plant   337 ------SLESASKIQLKSLAEEIQAITKGLEKLKQE----LTASETDGPVSQVFRKLLKEFISNA 391

  Fly  1254 DKSMAKLHQSLDECRDLFLETMRF--YHFSPKACTLTLAQCTPDQFFEYWTNFTNDFKDIWKKEI 1316
            :..:|.:.......|........:  ||:..:..|.||            .:|...||...::.:
plant   392 ETQVATVMALYYPARGNAEALAHYFGYHYPFEQVTATL------------LSFIRLFKKAHEENV 444

  Fly  1317 TSLLNELMKKSKQAQIESRR 1336
            .....|..|.:|:|::|..:
plant   445 KQAELEKKKAAKEAEMEKTK 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 90/437 (21%)
FH19NP_196395.1 FH2 68..437 CDD:396655 88/444 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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