DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and AFH1

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_189177.1 Gene:AFH1 / 822136 AraportID:AT3G25500 Length:1051 Species:Arabidopsis thaliana


Alignment Length:1153 Identity:250/1153 - (21%)
Similarity:402/1153 - (34%) Gaps:340/1153 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 LSIANDLQEVEEPDRASILHDTDLLVAPNSPAESSPDEELMALQLGKKLAQVLGSGAGSPLTPGT 327
            ||.::||          :..|..:|..|..|.:|.|.                     ||.:|..
plant    12 LSSSSDL----------VFADRRVLHEPFFPIDSPPP---------------------SPPSPPP 45

  Fly   328 MEPCAAGSGSPLANGELFNVSKAKKVELQNLSSRFTAAVTQTPP----GVTSSTPNESGVTGPAG 388
            :......|.:|.::.:            .|.|..|....:..||    ...|...|.|.:..|  
plant    46 LPKLPFSSTTPPSSSD------------PNASPFFPLYPSSPPPPSPASFASFPANISSLIVP-- 96

  Fly   389 PLGATTSSPSLETQSTVIISFKSSQTPV----------QSQTNSAASENVEDDT------APLPL 437
              .||.|.|:.:....|.||..||...|          :|:.|.  ..|..||:      :...:
plant    97 --HATKSPPNSKKLLIVAISAVSSAALVALLIALLYWRRSKRNQ--DLNFSDDSKTYTTDSSRRV 157

  Fly   438 PPPPPGFGTPTTPLLSSNVLKKVASFTVEKSSAGNNSS---------NPPNLCPTSDETTLLATP 493
            .||||....||.....:...::..:     ||..||||         |...:    ||.:|....
plant   158 YPPPPATAPPTRRNAEARSKQRTTT-----SSTNNNSSEFLYLGTMVNQRGI----DEQSLSNNG 213

  Fly   494 CSS----SLTVATLPPEIAVGAAAGGVAGGAG---------SRRGSSYVPEKLSFAAYEKFEGQM 545
            .||    |..:..|||.:..........|..|         |.|||....|.|:...   ..|| 
plant   214 SSSRKLESPDLQPLPPLMKRSFRLNPDVGSIGEEDEEDEFYSPRGSQSGREPLNRVG---LPGQ- 274

  Fly   546 LIKWLISTMQSNPK-----------SSSGDANQELFNTLALQFCNNLKYVGVLKQISNEHLDCGF 599
                       ||:           ||||...:..|.::                          
plant   275 -----------NPRSVNNDTISCSSSSSGSPGRSTFISI-------------------------- 302

  Fly   600 SPYEMYQWTHTEQPTTSLPLTPGKLDKVAAWPFSSTPSGIRALESASLASLGAGGVAGSLATIAT 664
            ||....:.:..:.|..|.| .|.:|   ..:.|..:|       |.|||||.:|           
plant   303 SPSMSPKRSEPKPPVISTP-EPAEL---TDYRFVRSP-------SLSLASLSSG----------- 345

  Fly   665 ASTASSDNQKTLQQILKK-RLLNCTTLAEVHAVVNELLSSVD-EPPRRPSK-------------- 713
               ..:.::..|.||.:. .:.:.||..|.:...|..|||.. .|.|||:.              
plant   346 ---LKNSDEVGLNQIFRSPTVTSLTTSPENNKKENSPLSSTSTSPERRPNDTPEAYLRSPSHSSA 407

  Fly   714 -----RCVNLT-ELLNA----------SEATVYEYNKTGAEGCVKSFTDAETQTESEDCEGTCKC 762
                 ||...: |:|.|          |:......|..|.:|.:|......:::.|......|..
plant   408 STSPYRCFQKSPEVLPAFMSNLRQGLQSQLLSSPSNSHGGQGFLKQLDALRSRSPSSSSSSVCSS 472

  Fly   763 GQS------------STKVSDNESAKEDGEKPHAVAPPP---PPPPPPLHAFVAPPPPPPPPPPP 812
            .:.            |::.|.:.|:..|.:..|::...|   ...|..|.:.|      ||||||
plant   473 PEKASHKSPVTSPKLSSRNSQSLSSSPDRDFSHSLDVSPRISNISPQILQSRV------PPPPPP 531

  Fly   813 PPPLANYG--------APPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPA 869
            ||||..:|        |.....||     |..||..|..      ||....|:::||.:|     
plant   532 PPPLPLWGRRSQVTTKADTISRPP-----SLTPPSHPFV------IPSENLPVTSSPMET----- 580

  Fly   870 PLPDPAEGNWFHRTNTMRKSAVNPPKP-MRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPD 933
              |:         |....::|...||| ::.|:|.::..|:.                       
plant   581 --PE---------TVCASEAAEETPKPKLKALHWDKVRASSD----------------------- 611

  Fly   934 EPPAANGADAPPTAPPATKEIWTEIEETPLDNIDEFTE-LFSRQAIAPVSKPKELKV-------K 990
                             .:.:|..:..:.....:|..| ||..:::.  :||.:.:.       .
plant   612 -----------------REMVWDHLRSSSFKLDEEMIETLFVAKSLN--NKPNQSQTTPRCVLPS 657

  Fly   991 RAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTSVVSLEALQHMSNIQATEDELQRIKE 1055
            ..:..:||||::::|:.|:.|:|:|...|:..|:...:...:..|.|:.:..:..|::|.:::| 
plant   658 PNQENRVLDPKKAQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLK- 721

  Fly  1056 AAGGDIP--LDHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQLIESED 1118
            |...|.|  |.|.|:||..:..|..|.:|:..:::.|.||..|..|.:..||:....::|..|..
plant   722 AYNDDSPVKLGHAEKFLKAMLDIPFAFKRVDAMLYVANFESEVEYLKKSFETLEAACEELRNSRM 786

  Fly  1119 LKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSKESHTTLLHFIVRTYIAQRRKEG- 1182
            ...:...:|..||.||.|. .||.|..|.||.|.||.|||..:..||||||:|:..|   |.|| 
plant   787 FLKLLEAVLKTGNRMNVGT-NRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEII---RAEGT 847

  Fly  1183 -----------VHPLEIRLPI-----PEPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVL 1231
                       :...::.|.:     .|.::|::||.||.|.:...:..|::.............
plant   848 RLSGNNTQTDDIKCRKLGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQVQS 912

  Fly  1232 AASRPEIMEPFKSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYH 1279
            ..:.....:.|...|:.|::.|::.:.::.........|..|...::|
plant   913 TITEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFH 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 95/420 (23%)
AFH1NP_189177.1 FH2 591..985 CDD:396655 94/417 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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