DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and Daam1

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:XP_038968188.1 Gene:Daam1 / 314212 RGDID:1305119 Length:1078 Species:Rattus norvegicus


Alignment Length:1190 Identity:273/1190 - (22%)
Similarity:445/1190 - (37%) Gaps:328/1190 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 TMEPCAAGSGSPLANGELFNVSKAKKVELQNLSSRFTAAVTQTPPG-----VTSSTPNESGVTGP 386
            ||||..     |:...|..:|..::.|:..:|:.:...|:...|..     ..|...::....| 
  Rat    40 TMEPAL-----PMPPVEELDVMFSELVDELDLTDKHREAMFALPAEKKWQIYCSKKKDQEENKG- 98

  Fly   387 AGPLGATTSSPSLETQSTVIISFKSSQTPVQSQTNSAASENVED-DTAPLPLPPPPPGFGTPTTP 450
                  .||.|.........::.:.|...::.:.....|:.:|. .||   |...|..|.|....
  Rat    99 ------ATSWPEFYIDQLNSMAARKSLLALEKEEEEERSKTIESLKTA---LRTKPMRFVTRFID 154

  Fly   451 L--LSS--NVLK----KVASFTVEKSSAG------NNSSNPPNLCPTSDETTLLATPCSSSLTVA 501
            |  ||.  |.||    :.:...:..|..|      |||....::...|:...::|    .||:..
  Rat   155 LDGLSCILNFLKTMDYETSESRIHTSLIGCIKALMNNSQGRAHVLAHSESINVIA----QSLSTE 215

  Fly   502 TLPPEIAVGAAAGGVAGGAGSRRGSSYVPEKLSFAAY--EKFEGQMLIKWL-ISTMQSNPKSSSG 563
            .:..::||....|.|....|..:  ..:...|.:..|  |:...|.||..| .||.:...:.|..
  Rat   216 NIKTKVAVLEILGAVCLVPGGHK--KVLQAMLHYQKYASERTRFQTLINDLDKSTGRYRDEVSLK 278

  Fly   564 DANQELFNTL--------ALQFCNNLKY----VGV------LKQISNEHLDCGFSPYEM------ 604
            .|.....|.:        :|.|..:|:|    :|:      |::..|..||.....:||      
  Rat   279 TAIMSFINAVLSQGAGVESLDFRLHLRYEFLMLGIQPVIDKLREHENSTLDRHLDFFEMLRNEDE 343

  Fly   605 ------YQWTH--TEQPTTSLPLTPGKLDKVAAWP-FSSTPSGIRALESASLASLGAGGVAGSLA 660
                  ::..|  |:..|....||..:|....|:| |.|.                       |.
  Rat   344 LEFAKRFELVHIDTKSATQMFELTRRRLTHSEAYPHFMSI-----------------------LH 385

  Fly   661 TIATASTASSDN--------QKTLQQILKKRLLNCTTLAEVHAVVNELLSSVDEPPRR--PSKRC 715
            .........|.|        .:.:|||:               :.|:.....|..|..  ..|..
  Rat   386 HCLQMPYKRSGNTVQYWLLLDRIIQQIV---------------IQNDKGQDPDSTPLENFNIKNV 435

  Fly   716 VNLTELLNASEATVYEYNKTGAEGCVKSFTDAETQTESEDCEGTCKCGQSSTKVSDNESAKEDGE 780
            |.:  |:|.:|...:   |..||...|...:.:.:.|.::.|...|..:....:......||..|
  Rat   436 VRM--LVNENEVKQW---KEQAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKMKEKLE 495

  Fly   781 KP-----------------------HAVAPPPPPPPPPLHAFVAPPPPPPPP------PPPPPPL 816
            |.                       .||....|..|.|    .||..|.||.      |||||||
  Rat   496 KETTEHKQVKQQVADLTAQLHELNRRAVCASVPGGPSP----GAPGGPFPPSGLGSLLPPPPPPL 556

  Fly   817 ANYGA-PPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPAPLPDPAEGNWF 880
            .:.|| ||||||.|||.    |||||.|...||.:|||..|:|.:..|..|     |.|      
  Rat   557 LSGGALPPPPPPLPPGG----PPPPPGPPPLGGILPPPGAPVSLTLKKKNI-----PQP------ 606

  Fly   881 HRTNTMRKSAVNPPKPMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDEPPAANGADAPP 945
              ||.::.           ..|:::          |.  |..:.|                    
  Rat   607 --TNALKS-----------FNWSKL----------PE--NKLEGT-------------------- 626

  Fly   946 TAPPATKEIWTEIEET------PLDNIDEFTELFSRQA---IAPVSKPKE-----------LKVK 990
                    :||||::|      .|::::.....:.||.   :...||.||           ||| 
  Rat   627 --------VWTEIDDTKVFKILDLEDLERTFSAYQRQQEFFVNNNSKQKEADAIDDALSSKLKV- 682

  Fly   991 RAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTS--------VVSLEALQHMSNIQATE 1047
              |.:.|:|..|::|..|:...|.:.:.||:.||..:|..        ...|:.:...|:|...|
  Rat   683 --KELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLE 745

  Fly  1048 D---ELQRIKEAAGGDIPLDHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRKLETVSQL 1109
            :   ||.|:.:|          ::||.::|.|:...:|:..:.|:.:|.|.|..:..|:|.:...
  Rat   746 EHKHELDRMAKA----------DRFLFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSS 800

  Fly  1110 SQQLIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSK-ESHTTLLHFIVRT 1173
            |::::.|..||.:..::|..|||||.|  |||.|.||.:..|.|:.|.||. :.:.||||::: |
  Rat   801 SEEVLRSSALKQLLEVVLAFGNYMNKG--QRGNAYGFKISSLNKIADTKSSIDKNITLLHYLI-T 862

  Fly  1174 YIAQRRKEGVHPLEIRLPIPEPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVLAASRPEI 1238
            .:     |..:|..:.|. .|..|:.:||:::..|:.::|..| :..|....|..:...:..|:.
  Rat   863 IV-----ENKYPKVLNLS-EELRDIPQAAKVNMTELDKEISTL-RSGLKAVETELEYQKSQPPQP 920

  Fly  1239 MEPFKSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTN 1303
            .:.|.|.:.:|:..|..|.:.:...|.|.::||.:.::  ||..:|     .:..||:||..:..
  Rat   921 GDKFVSVVSQFITLASFSFSDVEDLLAEAKELFTKAVK--HFGEEA-----GKIQPDEFFGIFDQ 978

  Fly  1304 FTNDFKDIWKKEITSLLNELMKKSK---------QAQIESRRNVSTKVEK--------------- 1344
            |.....:. |:|     ||.|:|.|         :||::.:|....|:.|               
  Rat   979 FLQAVTEA-KQE-----NENMRKRKEEEERRARLEAQLKEQRERERKMRKAKESSEESGEFDDLV 1037

  Fly  1345 ----SGRISLKERMLMRRSK 1360
                ||.:..|:...::|::
  Rat  1038 SALRSGEVFDKDLSKLKRNR 1057

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 108/458 (24%)
Daam1XP_038968188.1 Drf_GBD 45..232 CDD:399398 40/205 (20%)
Drf_FH3 235..439 CDD:368862 45/245 (18%)
PRK12704 444..>513 CDD:237177 12/71 (17%)
FH2 600..983 CDD:396655 113/476 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.