DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and Diaph1

DIOPT Version :10

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_001100863.3 Gene:Diaph1 / 307483 RGDID:1310707 Length:1266 Species:Rattus norvegicus


Alignment Length:775 Identity:204/775 - (26%)
Similarity:325/775 - (41%) Gaps:172/775 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   680 LKKRLLNCTTLAEVHAVVNELLSSVDEPPRRPSKRCVNLTELLNASEATVYEYNKTGAEGCVKSF 744
            |..::::.|.:.:..|...||...:|.......:..|.:.::.|..|..:.:....      |..
  Rat   464 LVDQMIDKTKVEKSEAKATELEKKLDSELTARHELQVEMKKMENDFEQKLQDLQGE------KDA 522

  Fly   745 TDAETQ---TESEDCEGTCKCGQSSTKVSDNESAKEDGEKPH------AVAP------------- 787
            .|:|.|   |:.:|.|  .:..:.:.:|:......||.:|..      ||||             
  Rat   523 LDSEKQQITTQKQDLE--AEVSKLTGEVAKLSKELEDAKKEMASLSAVAVAPSVSSSAAVPQAPP 585

  Fly   788 ---------PPPPPPPPLHAFVAPPPPPPPPP-----PPPPPLAN----------YGA-----PP 823
                     |||||||||.....|||||||.|     ||||||..          :|:     ||
  Rat   586 LPGDSGTVIPPPPPPPPLPGGAVPPPPPPPLPAGTGIPPPPPLPGGACISSSPQLFGSTAIPPPP 650

  Fly   824 P-------PPPPP-PGSGSAPPP---------PPPAPIEGGGGIPPPPPPMSASPSKTTISPAPL 871
            |       ||||| ||:.:.|||         |||.|:.|..|:||||||:..|..      .|.
  Rat   651 PLPGATAIPPPPPLPGATAIPPPPPLPGATAIPPPPPLPGATGVPPPPPPLPGSVG------VPP 709

  Fly   872 PDPAEGNWFHRTNTMRKSAVNPPKPMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDEPP 936
            |.|..|.          ..:.||.|..|        .||..|.||.          ....|..||
  Rat   710 PPPLPGG----------PGLPPPPPPFP--------GAPGIPPPPP----------GMGVPPPPP 746

  Fly   937 AANGADAPPTAP--PATKEI-------------------------WTEIEETPLDNIDEFTEL-- 972
            ...|..|.|..|  ...|::                         ||:::|...:|.:.|.:|  
  Rat   747 FGFGIPAAPVLPFGLTPKKVYKPEVQLRRPNWSKFVAEDLSQDCFWTKVKEDRFENNELFAKLTL 811

  Fly   973 -FSRQAIAPVSK--------PKELKVKRAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHID 1028
             ||.|.....:|        .|.::.|:.|.:||||.:.::|:.|...|..:|..||::.|..::
  Rat   812 AFSAQTKTSKAKKDQEGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVN 876

  Fly  1029 TSVVSLEALQHMSNIQATEDELQRIKEAAGGDIPLDHPEQFLLDISLISMASERISCIVFQAEFE 1093
            .:|::...:|::.......::|:.:.|.......|...|||.:.:..:.....|::.|:|:.:|.
  Rat   877 EAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFS 941

  Fly  1094 ESVTLLFRKLETVSQLSQQLIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVK 1158
            |.|..:..::.:|:...::|.:||:...:..:.|.:|||||.|:|..| |.|||:..|.||:|.|
  Rat   942 EQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAG-AFGFNISFLCKLRDTK 1005

  Fly  1159 SKESHTTLLHFIVRTYIAQRRKEGVHPLEIRLPIPEPADVERAAQMDFEEVQQQIFDLNKKFLGC 1223
            |.:...|||||:....      |..||..::.| .|.|.||:|:::..|.:|:.:..:.|:....
  Rat  1006 SADQKMTLLHFLAELC------ETDHPDVLKFP-DELAHVEKASRVSAENLQKNLDQMKKQIADV 1063

  Fly  1224 KRTTAKVLAASRPEIMEPFKSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYHFSPKACTLT 1288
            :|......||:  :..:.|..||..||:.|.:...||.........|:.|...::.|.||..:: 
  Rat  1064 ERDVQNFPAAT--DEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSV- 1125

  Fly  1289 LAQCTPDQFFEYWTNFTNDF----KDIWKKEITSLLNELMKKSKQAQIESRRNVSTKVEK 1344
                  ::||....||.|.|    |:..|:..|   .|.|:::|.|:.::.:....|.:|
  Rat  1126 ------EEFFMDLHNFRNMFLQAVKENQKRRET---EEKMRRAKLAKEKAEKERLEKQQK 1176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 119/468 (25%)
Diaph1NP_001100863.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..83
Drf_GBD 88..268 CDD:461886
Drf_FH3 274..464 CDD:461885 204/775 (26%)
SMC_prok_B <429..>564 CDD:274008 20/107 (19%)
FH2 763..1139 CDD:396655 100/392 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.